Dear Gromacs Users, I hava a membrane channel in a .gro file, but the -n and -c terminal are bigger, i mean the channel box is bigger( in x and y) than the membrane (512 POPC) , my 512 POPC is created using genconf with a 128POPC so i create a 1152 POPC with genconf nbox 3 3 1 , but there are to much POPC molecules, is there a tool in gromacs that i can select the box size and just that POPC molecules in that box instead of using the entire membrane,
or i have to chech the 128POPC, and delete molecule, and then prepare a more adecuate membrane.gro with genconf ? I would appreciate any help or advice Andres -- View this message in context: http://gromacs.5086.x6.nabble.com/gro-File-manipulation-tp5014514.html Sent from the GROMACS Users Forum mailing list archive at Nabble.com. -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to [email protected].
