Dear MD community, we have set up a web server that automatically sets up membrane simulation systems containing an arbitrary mixture of different lipids. The server, called MemGen (memgen.uni-goettingen.de) is not restricted to a specific set of lipid types, force fields, or MD software. Instead, MemGen works with any all-atom or united-atom lipid.
The user uploads lipids in one of various file formats (pdb, crd, xyz, ml2, gro), and the webserver returns a PDB file of the lipid patch with the requested number relative concentration of the lipids, requested number of water molecules per lipid, and salt content. Counterions are always added. Please give it a try at: http://memgen.uni-goettingen.de/ Happy simulating! The MemGen team at the University of Göttingen -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to [email protected].
