Dear Justin, I mean is any difficulty or special for gromacs to recognize the RNA in the PDB file? Brett
At 2015-03-04 10:04:32, "Justin Lemkul" <[email protected]> wrote: > > >On 3/3/15 8:56 PM, Brett wrote: >> Dear All, >> >> Will you please introduce me a protocol on gromacs molecular dynamics >> simulation of protein-RNA complex? >> > >It's fundamentally no different from any other biomolecule-in-water system. > >http://www.gromacs.org/Documentation/Tutorials > >-Justin > >-- >================================================== > >Justin A. Lemkul, Ph.D. >Ruth L. Kirschstein NRSA Postdoctoral Fellow > >Department of Pharmaceutical Sciences >School of Pharmacy >Health Sciences Facility II, Room 629 >University of Maryland, Baltimore >20 Penn St. >Baltimore, MD 21201 > >[email protected] | (410) 706-7441 >http://mackerell.umaryland.edu/~jalemkul > >================================================== >-- >Gromacs Users mailing list > >* Please search the archive at >http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! > >* Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > >* For (un)subscribe requests visit >https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a >mail to [email protected]. -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to [email protected].
