Hi, What did the .log file report about your attempt to append?
Mark On Mon, Jul 13, 2015 at 11:18 PM Andrea Spinelli <spinell...@gmail.com> wrote: > Hi, > I’m new user of Gromacs and I need extend a simulation of 1000ps. > On Gromacs 5.0.5 I use this command line as tutorial said. > > gmx convert-tpr -s md_0_1.tpr -extend 1000 -o md_0_2.tpr > gmx mdrun -v -s md_0_2.tpr -cpi md_0_1.cpt -append > > It produced the md_0_2.tpr , but when I run rms command to watch the state > of RMSD, it show only first 1000 ps, not from 0 to 2000 ps. Why? > What is the command I have to use? > > to view rmds I use this command line: > gmx rms -s md_0_2.tpr -f md_0_1.xtc -o rmsd.xvg > > Thanks a lot. > > > Andrea Spinelli > > Please do not print this email unless really need to. > Save paper, save trees, save space, save money - life matters. > > -- > Gromacs Users mailing list > > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before > posting! > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > * For (un)subscribe requests visit > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or > send a mail to gmx-users-requ...@gromacs.org. > -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
