Hi Justin, Welcome back. Thanks I solved it the other day. I got the coordinate and topology. Cheers James
On Monday, July 27, 2015, Justin Lemkul <jalem...@vt.edu> wrote: > > > On 7/24/15 4:16 AM, James Lord wrote: > >> Hi all, >> I want to make the the hydrophobic layer Justin has made but only have one >> .itp file from ATB for the hydrophobic layer (no topology and coordinate)? >> Any suggestion where and how to start to make this hydrophobic layer? I >> am >> aware of what Justin has suggested regarding using PRODRG >> <http://davapc1.bioch.dundee.ac.uk/cgi-bin/prodrg>,. any comments? >> > > I really don't understand what you're asking. Can you explain your > intended process in more detail? > > -Justin > > -- > ================================================== > > Justin A. Lemkul, Ph.D. > Ruth L. Kirschstein NRSA Postdoctoral Fellow > > Department of Pharmaceutical Sciences > School of Pharmacy > Health Sciences Facility II, Room 629 > University of Maryland, Baltimore > 20 Penn St. > Baltimore, MD 21201 > > jalem...@outerbanks.umaryland.edu | (410) 706-7441 > http://mackerell.umaryland.edu/~jalemkul > > ================================================== > -- > Gromacs Users mailing list > > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before > posting! > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > * For (un)subscribe requests visit > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or > send a mail to gmx-users-requ...@gromacs.org. > -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.