On 10/13/15 12:54 PM, thomas knitter wrote:
Hi there,,

I also tried to make the simulation picked from it left off. I typed the
commands below:

gmx convert-tpr -s em.tpr -extend 100 -o tpxout.tpr

gmx mdrun -s tpxout.tpr -cpi em.cpt

After a short while, it says job is terminated. So what do you suggest I do.


Well, why did the job terminate? What does the .log file tell you? What about stderr/stdout? Nothing here is diagnostic of any GROMACS issue, so it's impossible to provide useful advice.

-Justin

--
==================================================

Justin A. Lemkul, Ph.D.
Ruth L. Kirschstein NRSA Postdoctoral Fellow

Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 629
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201

jalem...@outerbanks.umaryland.edu | (410) 706-7441
http://mackerell.umaryland.edu/~jalemkul

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