Hi, The system has a gpu (gtx 590) with cuda libraries installed (I've run namd on the system). It also has mpi: mpic++ mpiCC mpiCC.openmpi mpicxx mpiexec mpif77 mpif90 mpirun mpicc mpicc.openmpi mpic++.openmpi mpicxx.openmpi mpiexec.openmpi mpif77.openmpi mpif90.openmpi mpirun.openmpi
CPU Architecture: x86_64 CPU op-mode(s): 32-bit, 64-bit Byte Order: Little Endian CPU(s): 8 On-line CPU(s) list: 0-7 Thread(s) per core: 1 Core(s) per socket: 8 Socket(s): 1 NUMA node(s): 2 Vendor ID: AuthenticAMD CPU family: 16 Model: 9 Stepping: 1 CPU MHz: 800.000 BogoMIPS: 4000.02 Virtualization: AMD-V L1d cache: 64K L1i cache: 64K L2 cache: 512K L3 cache: 5118K NUMA node0 CPU(s): 0-3 NUMA node1 CPU(s): 4-7 gcc gcc version 4.8.4 (Ubuntu 4.8.4-2ubuntu1~14.04.1) The error was about ../../lib/libgromacs.so.1.2.0: undefined reference to `clEnqueueMarkerWithWaitList' Any idea what that belongs to? Any other details let me know. Let me know Thanks, Eddie On Fri, Feb 12, 2016 at 11:26 PM, Nikhil Maroli <scinik...@gmail.com> wrote: > Hi, > What is your system details?Do you have GPU ,if yes CUDA library is > installed? > if not please install CUDA library and MPI packages too! > hope it will fix > > -- > Gromacs Users mailing list > > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before > posting! > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > * For (un)subscribe requests visit > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or > send a mail to gmx-users-requ...@gromacs.org. > -- _________________________________________________________ Edward Ackad, Ph.D <http://www.siue.edu/%7Eeackad> Assistant Professor of Physics Computational Nanophotonics Southern Illinois University Edwardsville (618) 650-2390 -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.