Dear users, Is there any script available to calculate % occupancy of residues with respect to time? This in continuation with my previous query on percentage of protein in contact with membrane??
Kind Regards, Antara -- Junior research fellow(project) Systems biology group CSIR-Institute of Genomics & Integrative Biology South Campus New Delhi - 110020 M : +91-9717970040 -- On Thu, May 19, 2016 at 6:35 PM, Antara mazumdar <antara.mazum...@igib.in> wrote: > Dear gromacs users, > > I have a peripheral membrane protein which I have simulated using Charmm > 36 in a mixed lipids bilayer. I want to calculate the percentage of protein > in contact with membrane wrt time. I already have residue wise distances > from membrane calculated. > > Can anyone suggest me how to go about it after this? > > Antara Mazumdar > > ISCB SC RSG-India > > Core Committee Member > -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
