On Tue, 12 Jul 2016 01:56:42 +0200
Alexander Alexander <[email protected]> wrote:

> I was wondering that how I can have for example two different
> "couple-moltype" in free energy part of my *.mdp file in FEP,
> alchemical transformation? The reason for having two is to perturb
> each of them differently in ordered steps.

You don't quite say what you are trying to do but you can always work
with more than one topology file.
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