... and you can get that file written by gmx cluster. Mark
On Thu, Sep 29, 2016 at 12:10 PM Tsjerk Wassenaar <tsje...@gmail.com> wrote: > Hi Sanket, > > gmx trjconv allows writing frames based on a frame index file or using a > xvg file and threshold. Check the help of trjconv on it. > > Hope it helps, > > Tsjerk > > On Thu, Sep 29, 2016 at 9:05 AM, Sanket Ghawali <sanket.ghaw...@gmail.com> > wrote: > > > Dear, gmx-users, > > > > I performed a cluster analysis using gmx cluster. I found a total of 178 > > clusters with the highest cluster having 63 members. I wish to save these > > members to a .trr or .pdb file in order to perform analysis on all these > > members as a whole and not on the representative structure which is > > generated using the -cl option. > > > > Any suggestions on how to go about doing this? > > > > > > Thanks, > > > > Sanket > > -- > > Gromacs Users mailing list > > > > * Please search the archive at http://www.gromacs.org/ > > Support/Mailing_Lists/GMX-Users_List before posting! > > > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > > > * For (un)subscribe requests visit > > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or > > send a mail to gmx-users-requ...@gromacs.org. > > > > > > -- > Tsjerk A. Wassenaar, Ph.D. > -- > Gromacs Users mailing list > > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before > posting! > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > * For (un)subscribe requests visit > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or > send a mail to gmx-users-requ...@gromacs.org. > -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.