Hi, What are all the GROMACS commands you have been using for this simulation? Why do you think it is not finishing all the steps?
Mark On Sat, 15 Oct 2016 10:55 Shilpa Janarthanan <shilpa.janartha...@gmail.com> wrote: > Hi, > While running an MD job for 10 ns, the system restarts in the final step of > MD (mdrun -v -deffnm md) > This happens continuously, and the data are not generated. > What system settings should I make, to make it run continuously until > finishing all the steps? > > Thank you. > > -- > Shilpa J > Department of Bioinformatics, > SASTRA University. > -- > Gromacs Users mailing list > > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before > posting! > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > * For (un)subscribe requests visit > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or > send a mail to gmx-users-requ...@gromacs.org. > -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
