What are all the GROMACS commands you have been using for this simulation?
Why do you think it is not finishing all the steps?
On Sat, 15 Oct 2016 10:55 Shilpa Janarthanan <shilpa.janartha...@gmail.com>
> While running an MD job for 10 ns, the system restarts in the final step of
> MD (mdrun -v -deffnm md)
> This happens continuously, and the data are not generated.
> What system settings should I make, to make it run continuously until
> finishing all the steps?
> Thank you.
> Shilpa J
> Department of Bioinformatics,
> SASTRA University.
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