As I read the printf statement for that in the source code, I think it is possible to define my own counter and control that messa print.
Thanks for your help On Oct 22, 2016 4:52 PM, "Mark Abraham" <mark.j.abra...@gmail.com> wrote: > Hi, > > In theory, yes. But energy minimization is only sometimes done on a > cluster, and when it is done on one, it's mostly part of a larger workflow, > for which there is a lot more I/O, network and terminal-output traffic from > other GROMACS system-preparation tasks. > > Mark > > On Sat, Oct 22, 2016 at 2:48 PM Mahmood Naderan <mahmood...@gmail.com> > wrote: > > > Well such message flooding that is written in the log file at every > step, > > the network will be a bottleneck affecting the performance of the other > > jobs > > > > Regards, > > Mahmood > > > > > > > > On Sat, Oct 22, 2016 at 3:42 PM, Mark Abraham <mark.j.abra...@gmail.com> > > wrote: > > > > > Hi, > > > > > > This is an energy minimization. Its behaviour is to print every step, > and > > > if that's verbose, it doesn't matter for the number of steps that are > > > typically required. A dynamical simulation has different needs and > works > > > differently. > > > > > > Mark > > > > > -- > > Gromacs Users mailing list > > > > * Please search the archive at > > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before > > posting! > > > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > > > * For (un)subscribe requests visit > > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or > > send a mail to gmx-users-requ...@gromacs.org. > > > -- > Gromacs Users mailing list > > * Please search the archive at http://www.gromacs.org/ > Support/Mailing_Lists/GMX-Users_List before posting! > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > * For (un)subscribe requests visit > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or > send a mail to gmx-users-requ...@gromacs.org. > -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.