Hi, I'm not sure whether I properly understand your description of the behaviour. But if you think you have a case where the tool doesn't do what its documentation says, please open an issue at https://redmine.gromacs.org and attach a tarball of files that will help us diagnose and fix it :-)
Mark On Thu, 16 Feb 2017 13:01 Chiara Parravicini < chiara.parravic...@guest.unimi.it> wrote: > Dear Gmx users, > > using GROMACS version 2016.1, I found the following error in the output of > the gmx hbond routine: when computed from different groups, where one is a > subset of the other one, hbonds from the same acceptor/donor pair do not > match. > > I known that this error has been already widely discussed in previous > gromacs versions. Is there any solution? > > Thanks > > Chiara > > > > -- > Chiara Parravicini, PhD > Laboratorio di Biochimica e Biofisica Computazionale > Dipartimento di Scienze Farmacologiche e Biomolecolari > Università degli Studi di Milano > Via Balzaretti 9, > 20133 Milano, Italy > Tel: +39 02-503-18256/18355 > Fax: +39 02-503-18284 > > > -- > Gromacs Users mailing list > > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before > posting! > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > * For (un)subscribe requests visit > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or > send a mail to gmx-users-requ...@gromacs.org. -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.