Simulating a protein with 100residues for 200ns doesn't show any stability. There are some deformation(long-bonds) in the structure throughout the process. Why is that so? Can I choose any stable structure in between these 200ns, for example say 176ns. Or is there any other way to make them work good.I need your valuable suggestions
-- *Regards,* *Rahul Suresh* *Research Scholar* *Bharathiar University* *Coimbatore* -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
