Hi all, I am running a simulation and I find that the output coordinates of the simulation stored in “final_coordinates.gro” are distinctively different to any of the frames from “trajectory.gro” which I obtain from :
trjconv –s file.tpr –f trajectory.xtc –o trajectory.gro When I visualise final_coordinates.gro they look wrong, when I visualise trajectory.gro frame by frame it looks correct. How can this be possible? Is it a common problem? Thank you, Amanda -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
