Many thanks Justin On Sat, Sep 9, 2017 at 7:03 PM, Justin Lemkul <[email protected]> wrote:
> > > On 9/9/17 7:15 AM, Tamisra Pal wrote: > >> HI, >> >> I got a fatal error which running an Ionic liquid simulation under NPT >> ensemble. >> What does this error mean and how can I resolve it? >> >> Fatal error: >> There is no domain decomposition for 20 nodes that is compatible with the >> given box and a minimum cell size of 1.5975 nm >> Change the number of nodes or mdrun option -rcon or -dds or your LINCS >> settings >> Look in the log file for details on the domain decomposition >> >> > Your system is too small to divide over that many nodes. > > -Justin > > -- > ================================================== > > Justin A. Lemkul, Ph.D. > Assistant Professor > Virginia Tech Department of Biochemistry > > 303 Engel Hall > 340 West Campus Dr. > Blacksburg, VA 24061 > > [email protected] | (540) 231-3129 > http://www.biochem.vt.edu/people/faculty/JustinLemkul.html > > ================================================== > -- > Gromacs Users mailing list > > * Please search the archive at http://www.gromacs.org/Support > /Mailing_Lists/GMX-Users_List before posting! > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > * For (un)subscribe requests visit > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or > send a mail to [email protected]. > -- Tamisra Pal Post Doctoral Research Fellow Technische Universität Darmstadt Institut für Festkörperphysik Hochschulstraße 6 64289 Darmstadt , Germany Room no : S2|07 63 Email : [email protected] Phone : +49 (0) 6151 16 21509 <callto:+496151165569> -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to [email protected].
