By runing
gmx mdrun -nb gpu -deffnm md_0_1
I see the following outputs
$ top -b | head -n 10
top - 19:14:10 up 7 min, 1 user, load average: 4.54, 1.40, 0.54
Tasks: 344 total, 1 running, 343 sleeping, 0 stopped, 0 zombie
%Cpu(s): 7.1 us, 0.5 sy, 0.0 ni, 91.9 id, 0.4 wa, 0.0 hi, 0.0 si, 0.0 st
KiB Mem : 16438496 total, 13462876 free, 1968196 used, 1007424 buff/cache
KiB Swap: 31250428 total, 31250428 free, 0 used. 14054796 avail Mem
PID USER PR NI VIRT RES SHR S %CPU %MEM TIME+ COMMAND
3604 mahmood 20 0 30.519g 525812 128788 S 918.8 3.2 6:58.38 gmx
1180 root 20 0 324688 69384 49712 S 6.2 0.4 0:14.41 Xorg
1450 mahmood 20 0 210228 7856 7192 S 6.2 0.0 0:00.17 ibus-engin+
$ nvidia-smi
Wed Feb 28 19:14:35 2018
+-----------------------------------------------------------------------------+
| NVIDIA-SMI 384.81 Driver Version: 384.81 |
|-------------------------------+----------------------+----------------------+
| GPU Name Persistence-M| Bus-Id Disp.A | Volatile Uncorr. ECC |
| Fan Temp Perf Pwr:Usage/Cap| Memory-Usage | GPU-Util Compute M. |
|===============================+======================+======================|
| 0 Quadro M2000 Off | 00000000:23:00.0 On | N/A |
| 65% 64C P0 58W / 75W | 292MiB / 4035MiB | 93% Default |
+-------------------------------+----------------------+----------------------+
+-----------------------------------------------------------------------------+
| Processes: GPU Memory |
| GPU PID Type Process name Usage |
|=============================================================================|
| 0 1180 G /usr/lib/xorg/Xorg 141MiB |
| 0 1651 G compiz 46MiB |
| 0 3604 C gmx 90MiB |
+-----------------------------------------------------------------------------+
Any idea?
Regards,
Mahmood
On Monday, February 26, 2018, 10:52:40 PM GMT+3:30, Szilárd Páll
<pall.szil...@gmail.com> wrote:
Hi,
Please provide details, e.g. the full log so we know what version, on what
hardware, settings etc. you're running.
--
Szilárd
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