On 3/6/18 9:03 AM, kordza...@aut.ac.ir wrote:
Hi Dr.Lemkul

Thank you very much for your answer, I think input file is correct, when I 
performed infaltegro again, I found this error

Argument "C1" isn't numeric in printf at inflategro.pl line 502.
Argument "C2" isn't numeric in printf at inflategro.pl line 502.
Argument "C3" isn't numeric in printf at inflategro.pl line 502.
Argument "N4" isn't numeric in printf at inflategro.pl line 502.
Argument "C5" isn't numeric in printf at inflategro.pl line 502.
Argument "C6" isn't numeric in printf at inflategro.pl line 502.
Argument "O7" isn't numeric in printf at inflategro.pl line 502.
Argument "P8" isn't numeric in printf at inflategro.pl line 502.
Argument "O9" isn't numeric in printf at inflategro.pl line 502.
Argument "C1" isn't numeric in printf at inflategro.pl line 502.
Argument "C2" isn't numeric in printf at inflategro.pl line 502.
Argument "C3" isn't numeric in printf at inflategro.pl line 502.
Argument "N4" isn't numeric in printf at inflategro.pl line 502.
Argument "C5" isn't numeric in printf at inflategro.pl line 502.
Argument "C6" isn't numeric in printf at inflategro.pl line 502.
Argument "O7" isn't numeric in printf at inflategro.pl line 502.
Argument "P8" isn't numeric in printf at inflategro.pl line 502.
Argument "O9" isn't numeric in printf at inflategro.pl line 502.

I don't know, what is that mean

It suggests that your input file is not, in fact, "correct."  There is probably some formatting issue somewhere.

I suggest adding some debug/print statements to the InflateGRO script to figure out where the problem lies, and inspect the offending lines.

-Justin

I can't attach my input file because is very large

Thank you very much

Regards

Azadeh


--
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Justin A. Lemkul, Ph.D.
Assistant Professor
Virginia Tech Department of Biochemistry

303 Engel Hall
340 West Campus Dr.
Blacksburg, VA 24061

jalem...@vt.edu | (540) 231-3129
http://www.biochem.vt.edu/people/faculty/JustinLemkul.html

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