On 3/10/18 9:18 AM, Mansoureh Shahbazi wrote:
Dear colleagues, How should I use -sep option to convert a frame of a 
trajectory to pdb? Can anyone send me the command line? Thanks

The -sep option is used to write a given interval of a trajectory into separate files. If you just want a single frame, you should use -dump and the corresponding time in ps.

-Justin

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Justin A. Lemkul, Ph.D.
Assistant Professor
Virginia Tech Department of Biochemistry

303 Engel Hall
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jalem...@vt.edu | (540) 231-3129
http://www.biochem.vt.edu/people/faculty/JustinLemkul.html

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