Thank you Dr. Abraham! I think I will write a script to do the analysis then.
Best Regards, Dan On Mon, Apr 9, 2018 at 12:57 PM, Mark Abraham <mark.j.abra...@gmail.com> wrote: > Hi, > > Unfortunately not all tools support dynamic selection groups yet, so the > only useful way to use that index file is by matching it with the correct > single frame from the trajectory, which you might get from e.g. gmx trjconv > split > > Mark > > On Fri, Apr 6, 2018, 21:37 Dan Gil <dan.gil9...@gmail.com> wrote: > > > Hi, > > > > I am trying to select particles that are z < 20 and z > 10 as a function > of > > time. > > > > I think I used gmx select correctly and generated an index file with > group > > names like "(z_<_.8_f2882_t23056.000)" > > > > Now I am unsure how I use this index file for gmx trjconv or gmx density. > > Does anybody have some advice? > > > > Thanks in advance. > > > > Best Regards, > > > > Dan Gil > > PhD Student > > Case Western Reserve University > > Department of Chemical and Biomolecular Engineering > > -- > > Gromacs Users mailing list > > > > * Please search the archive at > > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before > > posting! > > > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > > > * For (un)subscribe requests visit > > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or > > send a mail to gmx-users-requ...@gromacs.org. > > > -- > Gromacs Users mailing list > > * Please search the archive at http://www.gromacs.org/ > Support/Mailing_Lists/GMX-Users_List before posting! > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > * For (un)subscribe requests visit > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or > send a mail to gmx-users-requ...@gromacs.org. > -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.