Yes, this will generate velocities with a random seed. -- Szilárd
On Thu, Jul 5, 2018 at 5:15 PM MD <refm...@gmail.com> wrote: > Hi Gromacs folks, > > I am trying to re-run a 100 ns simulation with different velocities and > random seed. Would the setup from the mdp file as the following a good one? > > ; Velocity generation > gen_vel = yes ; assign velocities from Maxwell distribution > gen_temp = 300 ; temperature for Maxwell distribution > gen_seed = -1 ; generate a random seed > > Thanks in advance, > > Ming > -- > Gromacs Users mailing list > > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before > posting! > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > * For (un)subscribe requests visit > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or > send a mail to gmx-users-requ...@gromacs.org. > -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
