Hi Andrew, Follow the below link. Hope that helps. http://www.gromacs.org/Documentation/How-tos/Tool_Changes_for_5.0 (follow the 'g_sas' section)
Regards, Sudip On Wed, Sep 5, 2018 at 9:56 AM Andrew Srimalka Wijesekera < 2014s14...@stu.cmb.ac.lk> wrote: > Dear all, > > I'm currently studying the structural changes and thermodynamic properties > of a protein structure when binding the ligand. Here I have ran the MD run > for 50 ns and calculate the SASA value from the gromacs 5.1.2 version. > According to my knowledge I got only the total SASA value. But I want to > get the hydrophobic and hydrophilic SASA values seperately from the gromacs > 5.1.2 version as well. Therefore would you please help me to solve this > problem. > Thanks in advance. > -- > Gromacs Users mailing list > > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before > posting! > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > * For (un)subscribe requests visit > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or > send a mail to gmx-users-requ...@gromacs.org. > -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
