Dear GMX useres I am trying to convert .OFF and .FRCMOD files obtained from AMBER parameter database (Bryce Group: Computational Biophysics and Drug Design - University of Manchester) <http://sites.pharmacy.manchester.ac.uk/bryce/amber> to the format that GROMACS is compatible with in .rtp files*. so referred to GROMACS tutorial protein-ligand complex and downloaded acpype. installed it using its readme.txt file but whenever i typed ../acpype.py -i FFF.pdb At folder *acpype/test* (/Downloads/acpype-master/acpype) or (/Downloads/acpype-master/acpype/test) faced to this error:*
*bash: ../acpype.py: No such file or directory* *while when I typed whereis acpype in terminal , the operating system says :* *acpype: /usr/local/bin/acpype* * it means there is the executable file of acpype . so how come I type ../acpype.py -h or ../acpype -i FFF.pdb , the system says NO such file or directory?* *Is there anyone who ca help me?* *I really would be appreciated it if one help me to solve this and can convert the AMBER format files to GRMACS format files.* *best regards* *Farial* -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
