Hi, Sure! Try the search box on http://manual.gromacs.org/documentation/current/index.html for "renumber residues" for some suggestions.
Mark On Thu, 28 Feb 2019 at 07:54 Pandya, Akash <akash.pandya...@ucl.ac.uk> wrote: > Hi all, > > I have run my simulations and want to carry out analysis on my > trajectories using VMD and gromacs. When I analyse my trajectories (.gro > format) in VMD, the resid for my ligand differs to gromacs. I know this may > be expected, but is there a way to keep the numbering consistent between > the two either by running a script or another way? > > Akash > -- > Gromacs Users mailing list > > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before > posting! > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > * For (un)subscribe requests visit > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or > send a mail to gmx-users-requ...@gromacs.org. > -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
