On 3/9/19 12:23 PM, Stefano Guglielmo wrote:
Dear gromacs users,
I have a system with a topology generated from Amber and then converted
through ParmEd into gromacs-formatted stuff. I would like to add distance
restraints for several pairs of atoms (ca 20). Is it possible to add them
with grompp or should I edit the .top file some way?

Distance restraints need to be defined in the topology.

-Justin

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Justin A. Lemkul, Ph.D.
Assistant Professor
Office: 301 Fralin Hall
Lab: 303 Engel Hall

Virginia Tech Department of Biochemistry
340 West Campus Dr.
Blacksburg, VA 24061

jalem...@vt.edu | (540) 231-3129
http://www.thelemkullab.com

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