Dear all, I have done the long 200ns MD simulation of protein in water. I have received a comment from the reviewer that for the convergence of the results I have to perform multiple simulations using different initial conformations. Can anyone tell me the criteria for taking the different initial conformations of protein and how to check the convergence of the results? Any help regarding this will be highly appreciated. Thanks in advance Ishrat Jahan Research Scholar Department Of Chemistry A.M.U Aligarh -- Gromacs Users mailing list
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