Hi Hadi, It is well explained in Gromacs tutorial, in the below: http://www.mdtutorials.com/gmx/lysozyme/07_equil2.html
"Note that we are now including the -t flag to include the checkpoint file from the *NVT* equilibration" Cheers, Mahdi On Wed, Sep 18, 2019 at 5:43 PM Hadi Rahmaninejad <ha.rahma...@gmail.com> wrote: > Hello dear users, > > I am going to run a simulation according to a tutorial, but there is an > option of "-t nvt.cpt" that I don't know what is it, and I couldn't find > any explanation for that. I appreciate if any of you can give me a short > description of what is that doing, > > Best wishes, > Hadi > -- > Gromacs Users mailing list > > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before > posting! > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > * For (un)subscribe requests visit > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or > send a mail to gmx-users-requ...@gromacs.org. > -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.