Respected Researchers, I am trying to run GROMACS in parallel. So I have established connection using ssh, nfs and openmpi.
The connection is working fine as I have run Autodock Vina-MPI and other test files. I have installed the GROMACS in the mounted directory which is shared by all the computers (not in individual computer). When I run GROMACS in parallel it is showing 10 minutes for 10ps and when run on single computer it is showing 5 minutes. How to resolve this issue? Your response will be a big help for me. Shradheya Gupta BIF-DBT Rajasthan University -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
