Hi, The modified version of g_order provided as part of the SI in:
https://pubs.acs.org/doi/abs/10.1021/acs.jctc.7b00643# should be able to calculate the order parameters radially from your protein. Cheers Tom On 18 Mar 2020, at 11:02, Ipsita Basu <ibasu...@gmail.com> wrote: Dear all, I want to calculate lipid tail order parameter as a function of lateral distance from protein for ex the x axis will be the distance of the lipids from the protein in xy plane and y axis will be those sn1/sn2 tail order parameter (time averaged and averaged over the atoms). Is there any other methods rather than combination of g_select and g_order commands. Thanks in advance... Ipsita Basu Post Doctoral Fellow, -- Gromacs Users mailing list * Please search the archive at https://eur03.safelinks.protection.outlook.com/?url=http%3A%2F%2Fwww.gromacs.org%2FSupport%2FMailing_Lists%2FGMX-Users_List&data=01%7C01%7Ct.piggot%40soton.ac.uk%7C19046b888fa34aaf74f708d7cb2bcff5%7C4a5378f929f44d3ebe89669d03ada9d8%7C0&sdata=RJ5Y16bSxGIW0ZPSs1PD%2F4BIVwXiBBsNZnaY%2FHbGgZI%3D&reserved=0 before posting! * Can't post? Read https://eur03.safelinks.protection.outlook.com/?url=http%3A%2F%2Fwww.gromacs.org%2FSupport%2FMailing_Lists&data=01%7C01%7Ct.piggot%40soton.ac.uk%7C19046b888fa34aaf74f708d7cb2bcff5%7C4a5378f929f44d3ebe89669d03ada9d8%7C0&sdata=8FHKuAYDZLP2wcjMhnkF4nnve1rD7cNJRRN8MfsQ%2B6I%3D&reserved=0 * For (un)subscribe requests visit https://eur03.safelinks.protection.outlook.com/?url=https%3A%2F%2Fmaillist.sys.kth.se%2Fmailman%2Flistinfo%2Fgromacs.org_gmx-users&data=01%7C01%7Ct.piggot%40soton.ac.uk%7C19046b888fa34aaf74f708d7cb2bcff5%7C4a5378f929f44d3ebe89669d03ada9d8%7C0&sdata=IaakpluyP32Ea0PnARGOceAAkM2bpqyVXTVB29sccgo%3D&reserved=0 or send a mail to gmx-users-requ...@gromacs.org. -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.