Hi I have a 1000ns simulation of gpcr protein. The protein structure have 7 helix. 1. How will I calculate the tilt of each helix?
2. If it has to be done by generating the index file, what groups are meant to be added for index file? 3. What groups should be chosen when gmx bundle prompt to choose it? Kindly share your detailed note. -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
