Hi Paul, Thank you so much for your reply! That is very helpful. Best, Wei-Tse
On Mon, Apr 6, 2020 at 1:23 AM Paul bauer <paul.baue...@gmail.com> wrote: > Hello, > > you are using a plumed modified version that adds extra options to mdrun. > Our unit tests check that the output from mdrun -h stays invariant, and > this is no longer the case once you modify the code for plumed. > > You can ignore this failure in this case, but please mention in the > future if you are using modified versions of the code. > > Cheers > > Paul > > On 05/04/2020 21:23, Wei-Tse Hsu wrote: > > Dear gmx users, > > Recently I've been trying to install GROMACS 20201. After successfully > > compilng GROMACS 2020.1, when executing make check command, I > > encountered the following error. Specifically, one out of 56 tests > failed, > > which was related to Mdrun Test.WritesHelp. Looking at the error message, > > I'm still not sure what it means and how I should solve this problem. I > > wonder if anyone had this before that could give me some insights about > how > > I could solve the problem. Any help would be appreciated! > > > > Here is the error message in the middle. > > > > > > > > > > > > *[----------] 1 test from MdrunTest[ RUN ] > > > MdrunTest.WritesHelp/home/wei-tse/Documents/Software/GROMACS/gromacs-2020.1/src/testutils/refdata.cpp:867: > > Failure In item: /Help string Actual: 'SYNOPSIS* > > And here is the error message in the end. > > > > > > > > > > > > *The following tests FAILED: 43 - MdrunTests > > (Failed)CMakeFiles/run-ctest-nophys.dir/build.make:57: recipe for target > > 'CMakeFiles/run-ctest-nophys' failedCMakeFiles/Makefile2:1467: recipe for > > target 'CMakeFiles/run-ctest-nophys.dir/all' > > failedCMakeFiles/Makefile2:445: recipe for target > > 'CMakeFiles/check.dir/rule' failedMakefile:327: recipe for target 'check' > > failed* > > > > And here is the whole STDOUT message of the command printed by make > *check > >> make_check.log*. > > > https://drive.google.com/file/d/1Nb2BLzA2Vl_cjS1b_M_HNk0wkrfR2WKt/view?usp=sharing > > > > Best, > > Wei-Tse > > > -- > Paul Bauer, PhD > GROMACS Development Manager > KTH Stockholm, SciLifeLab > 0046737308594 > > -- > Gromacs Users mailing list > > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before > posting! > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > * For (un)subscribe requests visit > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or > send a mail to gmx-users-requ...@gromacs.org. > -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.
