Dear Leighanne,

Thanks for the suggestions. I will inquire about the sample holder. I'll also 
look into the custom calibration approach.

Best,
David

From: Gallington, Leighanne C. <[email protected]>
Sent: Friday, May 21, 2021 1:43 PM
To: [email protected]; Agyeman-Budu, David Nana <[email protected]>
Subject: Re: Calibration of histograms to known peaks

Do you still have access to your sample mount?  The most straightforward way 
would be to measure how much the sample was shifted up or downstream with a 
ruler as a starting point and see how much that improves things.
For the custom calibration approach: You can add custom calibrants to the drop 
down menu by creating a UserCalibrants.py file.  There are instructions in the 
ImageCalibrants.py file in the GSAS-II folder for the exact formatting.  This 
approach won't work if the copper peaks aren't sharp enough.
Another approach would be to calculate the shift in expected vs measured 
position for each copper peak, then interpolate a smoothly varying function and 
apply that correction to your data. This will only work for peaks inside the 
range of the copper peaks--the position of any peak at lower 2theta than the 
first Cu peak will be unreliable.

--
Leighanne C. Gallington, Ph.D.
Assistant Chemist
Advanced Photon Source (X-ray Science Division)
Argonne National Laboratory
Argonne, IL  60439
[email protected]<mailto:[email protected]>

________________________________
From: GSAS-II <[email protected]<mailto:[email protected]>> 
on behalf of Agyeman-Budu, David Nana via GSAS-II 
<[email protected]<mailto:[email protected]>>
Sent: Friday, May 21, 2021 3:17 PM
To: [email protected]<mailto:[email protected]> 
<[email protected]<mailto:[email protected]>>
Subject: [GSAS-II] Calibration of histograms to known peaks

Hello all,

I am looking for assistance to calibrate my operando XRD images without using 
the default calibrants, but with Cu peaks in my data. I found out that the 
peaks in the my operando XRD data are shifted, and this is due to the 
sample-to-detector distance differences between my LaB6 calibration measurement 
and the operando measurement (the sample cell mount increased the distance away 
from the detector). Even though I have a good calibration I cannot apply it 
correctly to reduce my data. It also seems that choice of calibrants in the 
calibration controls are limited to what is available in the drop box.

Any advice or help on this would be appreciated.

Thanks,
David

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