Hi Charles Please ignore my last message, I figured out the problem, It was the queues that were not properly set up in the server. I was able to execute in jobmanager-pbs but I have another question though.
I cannot see the output of the execution of globus-job-submit protos.cs.bgsu.edu/jobmanager-pbs /bin/hostname i used globus-job-get-output https://protos.cs.bgsu.edu:33541/24096/1234893868/ But that just waits and the server_logs says 02/17/2009 13:04:39;0080;PBS_Server;Req;req_reject;Reject reply code=15001(Unknown Job Id), aux=0, type=StatusJob, from [email protected] 02/17/2009 13:04:39;0080;PBS_Server;Req;req_reject;Reject reply code=15001(Unknown Job Id), aux=0, type=LocateJob, from [email protected] as the directory Globus had created inside $HOME/.globus/jobs/protos.cs.bgsu.edu/ are all gone. Any pointers here? Thanks Samir ________________________________________ From: Charles Bacon [[email protected]] Sent: Tuesday, February 17, 2009 11:44 AM To: Samir Khanal Cc: [email protected] Subject: Re: [gt-user] My first globus-job-submit/jobmanager-pbs script but error The fastest thing to do is edit the pbs.pm file so that it saves the script it is trying to qsub. Then qsub it by hand and go into a debugging loop there to figure out why it's not matching, then fix pbs.pm so it works for you. Alternatively, there should be some PBS logs about why the job isn't getting matched with a worker, so you could go check those out to see if they show you why; perhaps it's missing a required queue attribute or the like, or asking for the wrong number of processors, etc. Charles On Feb 17, 2009, at 10:42 AM, Samir Khanal wrote: > Any pointers on this yet? > > > -----Original Message----- > From: [email protected] > [mailto:[email protected] > ] On Behalf Of Samir Khanal > Sent: Monday, February 16, 2009 1:43 PM > To: [email protected] > Subject: [gt-user] My first globus-job-submit/jobmanager-pbs script > but error > > Hi All > > I was trying to get globus going (did it finally!) > I followed all the steps in > http://www.globus.org/toolkit/docs/4.2/4.2.1/admin/quickstart/ > the Quickstart guide (Wonderfully written!) > > I am able to run simple commands like echo etc but problem is with > job submission with PBS on the same machine. > > $globus-job-run protos.cs.bgsu.edu /bin/hostname > these kind of scripts work. > > but when i do > [...@protos ~]$ globus-job-submit protos.cs.bgsu.edu/jobmanager-pbs / > bin/hostname > https://protos.cs.bgsu.edu:58840/24878/1234808956/ > > [...@protos ~]$ globus-job-status > https://protos.cs.bgsu.edu:58840/24878/1234808956/ > PENDING > > [...@protos ~]$ qstat > Job id Name User Time Use > S Queue > ------------------------- ---------------- --------------- -------- > - ----- > 15.protos STDIN skhanal 0 > Q default > > > The Job is always in pending mode "Q" > > $pbsnodes also shows that none of the nodes are used. > > Am i missing something? > The Globus is build with jobmanager-pbs and jobmanager-condor. > > Your help will be greatly appreciated! > > Thanks > Samir >
