Re: [gt-user] 5.0.0 Build Problems

[Craig E. Ward]

I was able to build GT 5 on Fedora 12 after running the configure script with 
"--disable-system-openssl." I don't know what the security implications are for 
that change; I wasn't running in a production environment so it didn't matter 
to me.

Craig
Francesco Maiorano wrote:
I'm in troubles too.
I'm working on Fedora Core 12 and this is what I get after make command:

#################
/usr/local/globus-5.0.0/sbin/gpt-build   -srcdir=source-trees-thr/core/source 
gcc64dbgpthr
Can't locate Archive/Tar.pm in @INC (@INC contains: 
/usr/local/globus-5.0.0/lib/perl 
/usr/local/globus-5.0.0/lib/perl/x86_64-linux-thread-multi 
/usr/local/lib64/perl5/site_perl/5.10.0/x86_64-linux-thread-multi 
/usr/local/lib/perl5/site_perl/5.10.0 
/usr/lib64/perl5/vendor_perl/5.10.0/x86_64-linux-thread-multi 
/usr/lib/perl5/vendor_perl/5.10.0 /usr/lib/perl5/vendor_perl 
/usr/lib64/perl5/5.10.0/x86_64-linux-thread-multi /usr/lib/perl5/5.10.0 
/usr/lib/perl5/site_perl .) at 
/usr/local/globus-5.0.0/lib/perl/Grid/GPT/PkgMngmt.pm line 6.
BEGIN failed--compilation aborted at 
/usr/local/globus-5.0.0/lib/perl/Grid/GPT/PkgMngmt.pm line 6.
Compilation failed in require at 
/usr/local/globus-5.0.0/lib/perl/Grid/GPT/FilelistFunctions.pm line 10.
Compilation failed in require at 
/usr/local/globus-5.0.0/lib/perl/Grid/GPT/PkgMngmt/ExpandSource.pm line 10.
BEGIN failed--compilation aborted at 
/usr/local/globus-5.0.0/lib/perl/Grid/GPT/PkgMngmt/ExpandSource.pm line 10.
Compilation failed in require at 
/usr/local/globus-5.0.0/lib/perl/Grid/GPT/PkgMngmt/BuildMacros.pm line 9.
BEGIN failed--compilation aborted at 
/usr/local/globus-5.0.0/lib/perl/Grid/GPT/PkgMngmt/BuildMacros.pm line 9.
Compilation failed in require at 
/usr/local/globus-5.0.0/lib/perl/Grid/GPT/PkgMngmt/Build.pm line 9.
BEGIN failed--compilation aborted at 
/usr/local/globus-5.0.0/lib/perl/Grid/GPT/PkgMngmt/Build.pm line 9.
Compilation failed in require at /usr/local/globus-5.0.0/sbin/gpt-build line 96.
make: *** [globus_core-thr-compile] Error 2
#################

Any idea?
Thanks




Il giorno 02/mar/2010, alle ore 09.22, Ole Weidner ha scritto:

Hi,

I'm having trouble building gt-5.0.0 on a newly installed Mac OS 10.6 system:

/opt/globus-5.0.0//sbin/gpt-build   
-srcdir=source-trees-thr/database/c/sqliteodbc gcc32dbgpthr
gpt-build ====> CHECKING BUILD DEPENDENCIES FOR globus_database_sqliteodbc
gpt-build ====> Changing to 
/opt/globus-5.0.0/gt5.0.0-all-source-installer/source-trees-thr/database/c/sqliteodbc/sqliteodbc-0.74
gpt-build ====> BUILDING FLAVOR gcc32dbgpthr
.
.
.
*** Warning: This library needs some functionality provided by 
-lsqlite3_gcc32dbgpthr.
*** I have the capability to make that library automatically link in when
*** you link to this library.  But I can only do this if you have a
*** shared version of the library, which you do not appear to have.

*** Warning: This library needs some functionality provided by 
-liodbcinst_gcc32dbgpthr.
*** I have the capability to make that library automatically link in when
*** you link to this library.  But I can only do this if you have a
*** shared version of the library, which you do not appear to have.
*** The inter-library dependencies that have been dropped here will be
*** automatically added whenever a program is linked with this library
*** or is declared to -dlopen it.
/usr/bin/gcc -dynamiclib -undefined error -o .libs/libsqlite3odbc_gcc32dbgpthr-0.74.dylib  sqlite3odbc.lo  -L/opt/globus-5.0.0//lib -lc -install_name  /opt/globus-5.0.0//lib/libsqlite3odbc_gcc32dbgpthr-0.74.dylib 
Undefined symbols:
 "_sqlite3_column_name", referenced from:
     _drvgettable_row in sqlite3odbc.lo
     _s3stmt_step in sqlite3odbc.lo
     _s3stmt_step in sqlite3odbc.lo
     _setupdyncols in sqlite3odbc.lo
     _setupdyncols in sqlite3odbc.lo
 "_SQLGetPrivateProfileString", referenced from:
     _drvconnect in sqlite3odbc.lo
     _drvconnect in sqlite3odbc.lo
     _drvconnect in sqlite3odbc.lo
     _drvconnect in sqlite3odbc.lo
     _drvconnect in sqlite3odbc.lo
     _drvconnect in sqlite3odbc.lo
     _drvconnect in sqlite3odbc.lo
     _drvconnect in sqlite3odbc.lo
     _drvconnect in sqlite3odbc.lo
     _drvconnect in sqlite3odbc.lo
     _drvconnect in sqlite3odbc.lo
     _drvdriverconnect in sqlite3odbc.lo
     _drvdriverconnect in sqlite3odbc.lo
     _drvdriverconnect in sqlite3odbc.lo
     _drvdriverconnect in sqlite3odbc.lo
     _drvdriverconnect in sqlite3odbc.lo
     _drvdriverconnect in sqlite3odbc.lo
     _drvdriverconnect in sqlite3odbc.lo
     _drvdriverconnect in sqlite3odbc.lo
     _drvdriverconnect in sqlite3odbc.lo
     _drvdriverconnect in sqlite3odbc.lo
     _drvdriverconnect in sqlite3odbc.lo
 "_sqlite3_errcode", referenced from:
     _drvgettable in sqlite3odbc.lo
 "_sqlite3_column_text", referenced from:
     _drvgettable_row in sqlite3odbc.lo
     _s3stmt_step in sqlite3odbc.lo
     _s3stmt_step in sqlite3odbc.lo
 "_sqlite3_free", referenced from:
     _drvgettable in sqlite3odbc.lo
     _drvgettable in sqlite3odbc.lo
     _drvgettable in sqlite3odbc.lo
     _fixupdyncols in sqlite3odbc.lo
     _s3stmt_start in sqlite3odbc.lo
     _substparam in sqlite3odbc.lo
     _drvprimarykeys in sqlite3odbc.lo
     _drvprimarykeys in sqlite3odbc.lo
     _drvprimarykeys in sqlite3odbc.lo
     _drvspecialcolumns in sqlite3odbc.lo
     _drvspecialcolumns in sqlite3odbc.lo
     _drvspecialcolumns in sqlite3odbc.lo
     _drvspecialcolumns in sqlite3odbc.lo
     _drvspecialcolumns in sqlite3odbc.lo
     _drvspecialcolumns in sqlite3odbc.lo
     _drvspecialcolumns in sqlite3odbc.lo
     _drvforeignkeys in sqlite3odbc.lo
     _drvforeignkeys in sqlite3odbc.lo
     _drvforeignkeys in sqlite3odbc.lo
     _drvforeignkeys in sqlite3odbc.lo
     _drvforeignkeys in sqlite3odbc.lo
     _drvforeignkeys in sqlite3odbc.lo
     _drvforeignkeys in sqlite3odbc.lo
     _endtran in sqlite3odbc.lo
     _endtran in sqlite3odbc.lo
     _endtran in sqlite3odbc.lo
     _endtran in sqlite3odbc.lo
     _drvtables in sqlite3odbc.lo
     _drvtables in sqlite3odbc.lo
     _drvcolumns in sqlite3odbc.lo
     _drvcolumns in sqlite3odbc.lo
     _drvcolumns in sqlite3odbc.lo
     _drvstatistics in sqlite3odbc.lo
     _drvstatistics in sqlite3odbc.lo
     _drvstatistics in sqlite3odbc.lo
     _drvstatistics in sqlite3odbc.lo
     _drvstatistics in sqlite3odbc.lo
     _drvstatistics in sqlite3odbc.lo
     _drvprepare in sqlite3odbc.lo
     _drvexecute in sqlite3odbc.lo
     _drvexecute in sqlite3odbc.lo
     _drvexecute in sqlite3odbc.lo
     _drvexecute in sqlite3odbc.lo
     _drvexecute in sqlite3odbc.lo
     _drvexecute in sqlite3odbc.lo
     _drvexecute in sqlite3odbc.lo
 "_sqlite3_busy_handler", referenced from:
     _setsqliteopts in sqlite3odbc.lo
 "_sqlite3_exec", referenced from:
     _setsqliteopts in sqlite3odbc.lo
     _setsqliteopts in sqlite3odbc.lo
     _setsqliteopts in sqlite3odbc.lo
     _dbopen in sqlite3odbc.lo
     _endtran in sqlite3odbc.lo
     _drvexecute in sqlite3odbc.lo
     _drvexecute in sqlite3odbc.lo
 "_sqlite3_libversion", referenced from:
     _drvallocconnect in sqlite3odbc.lo
 "_sqlite3_column_blob", referenced from:
     _drvgettable_row in sqlite3odbc.lo
     _s3stmt_step in sqlite3odbc.lo
     _s3stmt_step in sqlite3odbc.lo
 "_sqlite3_close", referenced from:
     _dbopen in sqlite3odbc.lo
     _dbopen in sqlite3odbc.lo
     _drvdisconnect in sqlite3odbc.lo
 "_sqlite3_step", referenced from:
     _drvgettable in sqlite3odbc.lo
     _s3stmt_step in sqlite3odbc.lo
 "_sqlite3_free_table", referenced from:
     _fixupdyncols in sqlite3odbc.lo
     _drvprimarykeys in sqlite3odbc.lo
     _drvprimarykeys in sqlite3odbc.lo
     _drvspecialcolumns in sqlite3odbc.lo
     _drvspecialcolumns in sqlite3odbc.lo
     _drvspecialcolumns in sqlite3odbc.lo
     _drvspecialcolumns in sqlite3odbc.lo
     _drvspecialcolumns in sqlite3odbc.lo
     _drvspecialcolumns in sqlite3odbc.lo
     _drvspecialcolumns in sqlite3odbc.lo
     _drvforeignkeys in sqlite3odbc.lo
     _drvforeignkeys in sqlite3odbc.lo
     _drvforeignkeys in sqlite3odbc.lo
     _drvforeignkeys in sqlite3odbc.lo
     _drvforeignkeys in sqlite3odbc.lo
     _drvforeignkeys in sqlite3odbc.lo
     _drvforeignkeys in sqlite3odbc.lo
     _drvforeignkeys in sqlite3odbc.lo
     _drvforeignkeys in sqlite3odbc.lo
     _drvtables in sqlite3odbc.lo
     _drvcolumns in sqlite3odbc.lo
     _drvcolumns in sqlite3odbc.lo
     _drvstatistics in sqlite3odbc.lo
     _drvstatistics in sqlite3odbc.lo
     _drvstatistics in sqlite3odbc.lo
     _drvstatistics in sqlite3odbc.lo
     _drvstatistics in sqlite3odbc.lo
 "_sqlite3_column_decltype", referenced from:
     _s3stmt_coltype in sqlite3odbc.lo
 "_sqlite3_finalize", referenced from:
     _drvgettable in sqlite3odbc.lo
     _drvgettable in sqlite3odbc.lo
     _drvgettable in sqlite3odbc.lo
     _s3stmt_step in sqlite3odbc.lo
     _s3stmt_step in sqlite3odbc.lo
     _s3stmt_step in sqlite3odbc.lo
     _s3stmt_step in sqlite3odbc.lo
     _s3stmt_end in sqlite3odbc.lo
     _s3stmt_start in sqlite3odbc.lo
     _drvprepare in sqlite3odbc.lo
     _drvprepare in sqlite3odbc.lo
 "_sqlite3_column_bytes", referenced from:
     _drvgettable_row in sqlite3odbc.lo
     _s3stmt_step in sqlite3odbc.lo
 "_sqlite3_get_table", referenced from:
     _fixupdyncols in sqlite3odbc.lo
     _drvprimarykeys in sqlite3odbc.lo
     _drvspecialcolumns in sqlite3odbc.lo
     _drvspecialcolumns in sqlite3odbc.lo
     _drvspecialcolumns in sqlite3odbc.lo
     _drvspecialcolumns in sqlite3odbc.lo
     _drvforeignkeys in sqlite3odbc.lo
     _drvforeignkeys in sqlite3odbc.lo
     _drvforeignkeys in sqlite3odbc.lo
     _drvforeignkeys in sqlite3odbc.lo
     _drvtables in sqlite3odbc.lo
     _drvcolumns in sqlite3odbc.lo
     _drvstatistics in sqlite3odbc.lo
     _drvstatistics in sqlite3odbc.lo
     _drvstatistics in sqlite3odbc.lo
     _drvstatistics in sqlite3odbc.lo
 "_sqlite3_changes", referenced from:
     _drvexecute in sqlite3odbc.lo
 "_sqlite3_mprintf", referenced from:
     _drvgettable_row in sqlite3odbc.lo
     _drvgettable in sqlite3odbc.lo
     _fixupdyncols in sqlite3odbc.lo
     _s3stmt_start in sqlite3odbc.lo
     _substparam in sqlite3odbc.lo
     _drvprimarykeys in sqlite3odbc.lo
     _drvspecialcolumns in sqlite3odbc.lo
     _drvspecialcolumns in sqlite3odbc.lo
     _drvspecialcolumns in sqlite3odbc.lo
     _drvspecialcolumns in sqlite3odbc.lo
     _drvforeignkeys in sqlite3odbc.lo
     _drvforeignkeys in sqlite3odbc.lo
     _drvforeignkeys in sqlite3odbc.lo
     _drvtables in sqlite3odbc.lo
     _drvcolumns in sqlite3odbc.lo
     _drvstatistics in sqlite3odbc.lo
     _drvstatistics in sqlite3odbc.lo
     _drvstatistics in sqlite3odbc.lo
     _drvstatistics in sqlite3odbc.lo
     _drvprepare in sqlite3odbc.lo
     _drvexecute in sqlite3odbc.lo
 "_sqlite3_open", referenced from:
     _dbopen in sqlite3odbc.lo
 "_sqlite3_trace", referenced from:
     _dbopen in sqlite3odbc.lo
 "_sqlite3_errmsg", referenced from:
     _drvgettable in sqlite3odbc.lo
     _s3stmt_step in sqlite3odbc.lo
     _s3stmt_start in sqlite3odbc.lo
     _drvprepare in sqlite3odbc.lo
 "_sqlite3_column_type", referenced from:
     _drvgettable_row in sqlite3odbc.lo
     _s3stmt_coltype in sqlite3odbc.lo
     _s3stmt_step in sqlite3odbc.lo
     _s3stmt_step in sqlite3odbc.lo
 "_sqlite3_column_count", referenced from:
     _drvgettable in sqlite3odbc.lo
     _s3stmt_step in sqlite3odbc.lo
     _drvprepare in sqlite3odbc.lo
 "_sqlite3_prepare", referenced from:
     _drvgettable in sqlite3odbc.lo
     _s3stmt_start in sqlite3odbc.lo
     _drvprepare in sqlite3odbc.lo
ld: symbol(s) not found
collect2: ld returned 1 exit status
make[1]: *** [libsqlite3odbc_gcc32dbgpthr.la] Error 1

Any idea how to fix this? 

Thanks,
Ole



--
Craig E. Ward
USC Information Sciences Institute
310-448-8271
cw...@isi.edu