guix_mirror_bot pushed a change to branch master
in repository guix.
from 13a4171728 gnu: linux-libre 6.6: Update to 6.6.101.
new b567c3ffc4 gnu: python-case: Switch to pyproject.
new 1eeff20279 gnu: python-matplotlib-documentation: Fix build.
new 9fd47d1c47 gnu: python-colorspacious: Switch to pyproject.
new 5a93f27f0b gnu: carla: Improve package.
new 76abf43e47 gnu: python-pyliblo: Switch to pyproject.
new dcca59cf9f gnu: htseq: Switch to pyproject.
new 8ada9e232a gnu: python-vosk: Switch to pyproject.
new 5571bd2009 gnu: python-pyenchant: Switch to pyproject.
new b29b245166 gnu: python-pytest-sugar: Switch to pyproject.
new 4bf7fec9b0 gnu: python-pytest-sugar: Update to 1.0.0.
new 2eb2d3ba23 gnu: python-pyzstd: Switch to pyproject.
new 406592b117 gnu: python-py7zr: Ignore benchmark tests.
new d7d35b6b75 gnu: python-launchpadlib: Update to 2.1.0.
new 99f7b8fcf9 gnu: python-test-utils: Switch to pyproject.
new c43023090a gnu: python-nbsphinx: Switch to pyproject.
new 483ac59d8f gnu: python-sphinxcontrib-programoutput: Switch to
pyproject.
new ea571d67f4 gnu: python-pytimeparse: Switch to pyproject.
new 11902d484c gnu: python-css-html-js-minify: Update to 2.5.5-0.8f72452.
new 2f1dd4f326 gnu: python-asyncmy: Update to 0.2.10.
new 77faad4aa2 gnu: python-pyte: Switch to pyproject.
new fc194e7755 gnu: python-pytest-isort: Switch to pyproject.
new bac69decd3 gnu: python-pyro-api: Switch to pyproject.
new 0dba518cb1 gnu: python-radian: Update to 0.6.15.
new 1679d70724 gnu: python-py2bit: Update to 0.3.3.
new 3a3573fae8 gnu: python-rchitect: Update to 0.4.8.
new 4fda9a96ff gnu: python-pyte: Update to 0.8.2.
new 2484aec81e gnu: python-curtsies: Update to 0.4.3.
new 35f2fd68b0 gnu: python-case: Move to (gnu packages python-check).
new e3c7460568 gnu: python-case: Deprecate package.
new 123ec7f705 gnu: python-zarr: Update to 2.18.7.
new b91c64a3a5 gnu: python-anndata: Update to 0.12.1.
new e716c800b6 gnu: python-mudata: Update to 0.3.2.
new 41df2ab16d gnu: r-hdf5dataframe: Update to 0.0.0-2.1e30e6b.
new 4dbe551971 gnu: r-stringfish: Update to 0.17.0, fix build with gcc@14.
new 659d44ce19 gnu: r-voltron: Fix tests.
new e3a90b8150 gnu: lmms: Fix build.
new 51e8d1cb95 gnu: salmon: Update to 1.10.3, fix build.
new f470fc04d4 gnu: java-cisd-jhdf5: Fix build with gcc@14.
new 80e27d57bf gnu: blast+: Update to 2.17.0.
new c1aa803542 gnu: Add python-hatch-docstring-description.
new c22b6731d4 gnu: Add python-session-info2.
new debc80b4d4 gnu: python-statsmodels: Update to 0.14.4.
new 3d7c49157b gnu: python-seaborn: Update to 0.13.2.
new 6e38e8ab54 gnu: python-scanpy: Update to 1.11.2.
new bf812960e5 gnu: Add python-dcor.
new d10e1abebb gnu: Add python-legendkit.
new 018b8a474e gnu: Add python-marsilea.
new 962948f2a4 gnu: Add python-decoupler.
new 702b64e41e gnu: python-liana-py: Update to 1.6.0.
new e60839c316 gnu: mcl: Fix build with gcc@14.
new 6981f0adbf gnu: ivar: Update to 1.4.4, fix build with gcc@14.
The 51 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "add" were already present in the repository and have only
been added to this reference.
Summary of changes:
gnu/packages/audio.scm | 22 ++--
gnu/packages/bioinformatics.scm | 226 +++++++++++++++++++++---------------
gnu/packages/check.scm | 8 +-
gnu/packages/cran.scm | 29 ++++-
gnu/packages/databases.scm | 67 +++++++++--
gnu/packages/enchant.scm | 6 +-
gnu/packages/java.scm | 1 +
gnu/packages/machine-learning.scm | 34 ++++--
gnu/packages/music.scm | 6 +
gnu/packages/python-build.scm | 24 ++++
gnu/packages/python-check.scm | 44 +++++--
gnu/packages/python-compression.scm | 32 ++---
gnu/packages/python-science.scm | 99 +++++++++++++---
gnu/packages/python-web.scm | 70 ++++++-----
gnu/packages/python-xyz.scm | 144 +++++++++++------------
gnu/packages/sphinx.scm | 52 ++++++---
gnu/packages/statistics.scm | 88 +++++++++++---
gnu/packages/terminals.scm | 33 ++----
gnu/packages/time.scm | 31 +++--
19 files changed, 665 insertions(+), 351 deletions(-)
