guix_mirror_bot pushed a commit to branch python-team
in repository guix.
commit ba7e13bba5d159f22b5706bd17e50dca42ea3907
Author: Hugo Buddelmeijer <[email protected]>
AuthorDate: Wed Sep 24 22:09:36 2025 +0200
gnu: python-scipy: Reduce closure size.
As documentation was not built at all, this change removes everything
requiring for to reduce the closue size.
* gnu/packages/python-science.scm (python-scipy): Adjust inputs
[arguments] <phases>: Remove 'install-doc.
[propagated-inputs]: Keep only python-numpy.
[native-inpusts]: Remove python-hypothesis, and python-pytest-cov; add
python-mpmath, python-numpydoc, python-pythran, python-rich-click,
python-threadpoolctl, and python-typing-extensions.
Fixes: guix/guix#2944.
Change-Id: I97e4914c3d705b47b276d3f88dc938f26b0d27a5
Co-authored-by: Sharlatan Hellseher <[email protected]>
Signed-off-by: Sharlatan Hellseher <[email protected]>
---
gnu/packages/python-science.scm | 63 +++++++++--------------------------------
1 file changed, 13 insertions(+), 50 deletions(-)
diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm
index c9d75c202b..4c0f551289 100644
--- a/gnu/packages/python-science.scm
+++ b/gnu/packages/python-science.scm
@@ -3105,53 +3105,7 @@ cross-validation.")
(string-append
"import scipy; scipy.test('fast', parallel="
(number->string (parallel-job-count))
- ", verbose=2)"))))))
- (add-after 'check 'install-doc
- (lambda* (#:key outputs #:allow-other-keys)
- ;; FIXME: Documentation cannot be built because it requires
- ;; a newer version of pydata-sphinx-theme, which currently
- ;; cannot build without internet access:
- ;; <https://github.com/pydata/pydata-sphinx-theme/issues/628>.
- ;; Keep the phase for easy testing.
- (let ((sphinx-build (false-if-exception
- (search-input-file input
"bin/sphinx-build"))))
- (if sphinx-build
- (let* ((doc (assoc-ref outputs "doc"))
- (data (string-append doc "/share"))
- (docdir (string-append
- data "/doc/"
- #$(package-name this-package) "-"
- #$(package-version this-package)))
- (html (string-append docdir "/html")))
- (with-directory-excursion "doc"
- ;; Build doc.
- (invoke "make" "html"
- ;; Building the documentation takes a very
long time.
- ;; Parallelize it.
- (string-append "SPHINXOPTS=-j"
- (number->string
(parallel-job-count))))
- ;; Install doc.
- (mkdir-p html)
- (copy-recursively "build/html" html)))
- (format #t "sphinx-build not found, skipping~%"))))))))
- (propagated-inputs
- (append
- (if (supported-package? python-jupytext) ; Depends on pandoc.
- (list python-jupytext)
- '())
- (list python-matplotlib
- python-mpmath
- python-mypy
- python-numpy
- python-numpydoc
- python-pydata-sphinx-theme
- python-pydevtool
- python-pythran
- python-rich-click
- python-sphinx
- python-threadpoolctl
- python-typing-extensions)))
- (inputs (list openblas pybind11-2.10))
+ ", verbose=2)")))))))))
(native-inputs
(list gfortran
;; XXX: Adding gfortran shadows GCC headers, causing a compilation
@@ -3162,14 +3116,23 @@ cross-validation.")
python-click
python-cython-0
python-doit
- python-hypothesis
+ python-mpmath
+ python-numpydoc
python-pooch
python-pycodestyle
python-pydevtool
python-pytest
- python-pytest-cov
python-pytest-timeout
- python-pytest-xdist))
+ python-pytest-xdist
+ python-pythran
+ python-rich-click
+ python-threadpoolctl
+ python-typing-extensions))
+ (inputs
+ (list openblas
+ pybind11-2.10))
+ (propagated-inputs
+ (list python-numpy))
(home-page "https://scipy.org/";)
(synopsis "The Scipy library provides efficient numerical routines")
(description "The SciPy library is one of the core packages that make up
