guix_mirror_bot pushed a change to branch python-team
in repository guix.
discard fdc2a59f34 gnu: python-deeptools: Update to 3.5.6.
discard f0073b0cd9 gnu: python-deepdish: Use python-numpy@1.
discard 21536fed2b gnu: python-tdda: Skip one more test.
discard acea1b1ed5 gnu: piglit: Use python-numpy@1.
discard ff14bd1160 gnu: cnvkit: Update to 0.9.12-0.52f367b.
discard f9dfcde14f gnu: python-pyfaidx: Update to 0.9.0.3.
discard 6ced2174c1 gnu: python-pomegranate: Move to machine-learning.
discard 0cd6bae019 gnu: python-pomegranate: Update to 1.1.0.
discard a8b77d7f56 gnu: Add python-apricot-select.
discard 7a69770e6c gnu: python-presto: Improve package, fix tests.
discard 1462a675a1 gnu: python-brian2: Update to 2.10.1.
discard cc8fbdf42c gnu: macs-3: Update to 3.0.3.
discard aff2ed5f49 gnu: python-cellbender: Update to 0.3.2.
discard f97cf8a6e2 gnu: python-captum: Update to 0.8.0-0.4fade3a.
discard 6816844146 gnu: mageck: Use python-numpy@1.
discard ec1b1f341e gnu: idr: Fix build.
discard 64f996e9df gnu: python-cnmf: Update to 1.7.0.
discard 022441fc8f gnu: python-cooltools: Update to 0.7.1.
discard ac63fcfda4 gnu: python-magic-impute: Update to 3.0.0.
discard 8ebc861764 gnu: Add python-scprep.
discard a13522e6e4 gnu: python-fcsparser: Use python-numpy@1.
discard 42c5dba3a6 gnu: python-graphtools: Update to 2.1.0.
discard 51d0e2645e gnu: python-pygsp: Update to 0.6.0.
discard 0baab2ffa8 gnu: Add python-pyunlocbox.
discard 9ebefb645c gnu: python-verde: Update to 1.8.1.
discard ca28f2e4bc gnu: python-metacells: Simplify.
discard b4892282eb gnu: python-crosshair: Update to 0.0.101.
discard 820a6ad0f2 gnu: Add python-pygls.
discard ed467d93b6 gnu: Add python-lsprotocol.
discard b99ba101ef gnu: python-fastcluster: Update to 1.3.0.
discard 9b7d43ab13 gnu: python-cvxpy: Update to 1.7.5.
discard a4b3562ea8 gnu: python-scs: Update to 3.2.10.
discard b739b230fd gnu: Add scs.
discard 0a64c761e8 gnu: python-osqp: Update to 1.0.5.
discard 543e6f49ea gnu: Add osqp.
discard bc1fb92b07 gnu: Add qdldl.
discard b387b9a426 gnu: Remove python-eventio-1.
discard 6818258a41 gnu: tangos: Update to 1.11.0.
discard 5d99bdf9fc gnu: python-chaospy: Update to 4.3.21.
discard 0e06efa4dc gnu: python-numpoly: Update to 1.3.4.
discard 6baae514fc gnu: python-pyudev: Update to 0.24.4.
discard dac51ca187 gnu: python-plotly: Update to 5.24.1.
discard 8959003c05 gnu: Add python-array-api-strict.
discard fc379bb404 gnu: python-ipywidgets: Update to 8.1.4.
discard 1edf8a9759 gnu: python-jupyterlab-widgets: Update to 3.0.12.
discard 448d4bfdb2 gnu: python-vaex-core: Update to 4.19.0.
discard 8154718da1 gnu: htseq: Update to 2.0.9.
discard 66b31f6cbd gnu: python-coolbox: Update to 0.3.9.
discard 8081eb5e4f gnu: python-cooler: Update to 0.10.4.
discard 78969b4dac gnu: python-circe: Update to 0.3.9.
discard 77df531a47 gnu: python-scanpy: Update to 1.11.5.
discard c55efc2a9a gnu: python-statsmodels: Update to 0.14.5.
discard b9b6c2ab41 gnu: python-biopython: Update to 1.86.
discard 5e6934d309 gnu: python-fbpca: Fix tests.
discard cdfbe6487f gnu: python-pandera: Update to 0.27.1.
discard 5718622073 gnu: pyscenic: Add missing python-diptest.
discard 86fa9170a5 gnu: Add python-diptest.
discard 4555f818de gnu: python-scikit-bio: Update to 0.7.1.post1.
discard 78b528bcd3 gnu: endgame-singularity: Update to 1.1.
discard 1da8018767 gnu: python-biom-format: Update to 2.1.17.
discard 95230deb83 gnu: Add python-anndata-minimal.
discard 00f6dcf190 gnu: python-anndata: Update to 0.12.7.
discard a24dca7db4 gnu: python-awkward: Update to 2.8.5.
discard a7e1e1a833 gnu: python-awkward-cpp: Update to 47.
discard 7af6ca2ca6 gnu: crossmap: Update to 0.7.3.
discard 36c2ea50dd gnu: python-pynbody: Use python-ipython-minimal for tests.
discard a1bbe73b7f gnu: python-pycollada: Update to 0.9.2.
discard 34d044b428 gnu: python-notebook: Fix build.
discard e843ee1860 gnu: Add python-jupyter-client-7.
discard 5971a1b097 gnu: python-jupyter-console: Move to jupyter.
discard 6b97af4d4e gnu: python-jupyter-console: Update to 6.6.3.
discard 1a14d493ba gnu: python-ipykernel: Update to 7.1.0.
discard 7449d77bb9 gnu: python-jupyter-client: Update to 8.7.0.
discard f6abcb0af4 gnu: Add python-pytest-jupyter-minimal.
discard 36a84d13f6 gnu: Remove python-jupyter-console-minimal.
discard 3dc6b683f6 gnu: python-jupyter-client: Move to jupyter.
discard 1033e1f927 gnu: python-jupyter-client: Simplfy bootstrapping.
discard c55f8a3cbf gnu: python-jupyter-core: Update to 5.9.1.
discard 0009eb306d gnu: python-jupyter-core: Move to jupyter.
discard 565d00ac59 gnu: Add python-ipython-minimal.
discard 38f32baf4a gnu: python-ipython: Update to 9.8.0.
discard 9c9fe705be gnu: python-contourpy: Update to 1.3.3.
discard a2b9830210 gnu: python-pythran: Clean up artifacts.
discard 40020d7b3c gnu: python-pytest-doctestplus: Update to 1.6.0.
discard ac5bef570b gnu: python-pytest-randomly: Move to python-check.
discard cd299167cb gnu: python-pytest-randomly: Update to 4.0.1.
discard 54709697b8 gnu: python-stcal: Adjust relax-requirments phase.
discard 2229e87653 gnu: python-jmespath: Switch to pyproject.
discard 8f3733604f gnu: python-specutils: Remove relax-requirements phase.
discard 3fceda898f gnu: python-asap3: Update to 3.13.10.
discard a091094c98 gnu: python-ase: Update to 3.26.0.
discard a3baeb8708 gnu: urh: Use python-numpy@1.
discard b59418a571 gnu: python-loompy: Update to 3.0.8.
discard 34f3856e73 gnu: python-hnswlib: Update to 0.8.0.
discard 3eca986502 gnu: python-romancal: Remove relax-requirements phase.
discard 53b7174bd2 gnu: python-regions: Update to 0.11.
discard 69f55b07b5 gnu: python-kalepy: Skip 5 tests.
discard 63d0ee5a93 gnu: python-sunkit-spex: Update to 0.4.0-0.bb544c4.
discard 8920d6a020 gnu: python-numdifftools: Update to 0.9.42.
discard 2db81dacff gnu: python-meshio: Skip some tests.
discard f07d467728 gnu: python-lofar-h5plot: Use python-numpy@1.
discard 8fc8278992 gnu: python-losoto: Update to 2.6.0.
discard cd1666c04b gnu: Add python-lofar-parameterset.
discard 1e9a8d53f8 gnu: python-glue-astronomy: Skip 3 tests.
discard 7071853d60 gnu: python-seaborn: Skip 3 tests.
discard b48c16e02b gnu: veusz: Update to 4.2.
discard 796fa68288 gnu: websockify: Update to 0.13.0.
discard b4e7bdd91d gnu: python-jwcrypto: Adjust inputs.
discard e46d8fa530 gnu: python-modin: Update to 0.37.1.
discard ac56a0bd60 gnu: python-pyopengl: Skip one test.
discard beb22055b9 gnu: python-cleanlab: Fix build.
discard 12dfdb9c5d gnu: python-arviz: Update to 0.22.0.
discard da30db4a1c gnu: python-arboreto: Update to 0.1.6-0.79f916b.
discard 10e11cb647 gnu: python-naima: Update to 0.10.3.
discard d40b785e6b gnu: python-xarray-einstats: Update to 0.9.1.
discard 2a011e74e6 gnu: python-spectral-cube: Update to 0.6.7.
discard 0bfe739b45 gnu: python-reproject: Update to 0.19.0.
discard f3ba67c9db gnu: python-dask-image: Update to 2025.11.0.
discard 72bbedf527 gnu: python-xarray: Update to 2025.12.0.
discard 6a5f51fc20 gnu: catch2: Update to 2.13.10.
discard 1e03cf6ea5 gnu: python-numba: Update to 0.62.1.
discard 854885a3d3 gnu: python-llvmlite: Update to 0.45.0.
discard bd52586ad3 gnu: pyscenic: Update to 0.12.1-2.06bafba4.
discard 4e7ef27ae1 gnu: python-tables: Update to 3.10.2-0.aad9079.
discard f6a82f4fb4 gnu: python-annoy: Add python-h5py.
discard c9333bc7f4 gnu: cpat: Update to 3.0.5.
discard 3a7b671d33 gnu: python-linetools: Skip 2 tests.
discard 12d63f28dd gnu: python-kanon: Use python-numpy@1.
discard a7d4ad6a74 gnu: python-zodipy: Remove relax-requirements phase.
discard 72c2c6174a gnu: python-jacobi: Fix tests.
discard 5f8281dc95 gnu: python-statmorph: Adjust inputs.
discard 038817b5c5 gnu: python-scikit-image-next: Deprecate by
python-scikit-image.
discard a9cba49a5e gnu: python-scikit-image: Update to 0.25.2.
discard 9882796ce0 gnu: python-fits-schema: Update to 0.5.6-0.ccffe04.
discard eeb2a9488f gnu: python-astrodata: Use python-numpy@1.
discard 0e8bcea73e gnu: python-jwst: Remove relax-requirements phase.
discard 20378b34c5 gnu: python-gwcs: Remove relax-requirements phase.
discard 68f710796a gnu: python-fgivenx: Update to 2.4.2-0.cf51dbf.
discard c7d6cbaff7 gnu: genetic: Use python-pynbody@2.
discard b92e68c961 gnu: python-esutil: Fix build with gcc-14.
discard 0226b32a4e gnu: python-nox: Update to 2025.11.12.
discard 2532c097d8 gnu: python-ctapipe: Update to 0.28.0.
discard 3daa214f18 gnu: python-cesium: Update to 0.12.4.
discard 5fc5ace0ea gnu: blender: Use python-numpy@1.
discard ba4523f11e gnu: checkm: Update to 1.2.4.
discard 2ed1cf6758 gnu: python-blacksheep: Update to 2.4.5.
discard 26c994e0b7 gnu: didjvu: Update to 0.11.0.
discard 08c860a9de gnu: Add python-py3exiv2.
discard 6e050f428d gnu: python-guardpost: Update to 1.0.4.
discard 73b857d182 gnu: python-astroml: Fix build.
discard de5ecbeb7c gnu: python-stwcs: Remove relax-requirements phase.
discard e77e8d59e6 gnu: python-cloudpathlib: Fix tests.
discard c4951bdf91 gnu: python-algopy: Update to 0.7.2.
discard 7058ef17db gnu: python-dendropy: Update to 5.0.8.
discard 6b0db58bf8 gnu: python-django-ninja: Update to 1.5.1.
discard c54e065ca9 gnu: python-xmp-toolkit: Update to 2.1.0.
discard a00337e11a gnu: python-astropy-6: Skip some tests.
discard 4b868a3f20 gnu: python-fastapi: Update to 0.124.0.
discard d331de4069 gnu: Add python-pydantic-extra-types.
discard 859954d3b8 gnu: Add python-annotated-doc.
discard 25e34add9e gnu: Add python-cron-converter.
discard 6c57715b16 gnu: Add python-ulid.
discard 5dc33ca130 gnu: python-casa-formats-io: Fix tests.
discard 0e2968de1d gnu: python-pydantic-settings: Update to 2.12.0.
discard 02e4396f5f gnu: python-netcdf4: Update to 1.7.2.
discard 9c56ede839 gnu: netcdf: Update to 4.9.2.
discard 73662811a4 gnu: python-blosc2: Update to 3.12.2.
discard a4294533cd gnu: c-blosc2: Update to 2.22.0.
discard 5c545207f6 gnu: python-ndindex: Update to 1.10.1.
discard 6741da7131 gnu: python-numexpr: Update to 2.14.1.
discard 609797b08b gnu: python-distributed: Update to 2025.11.0.
discard 4b5ab8b205 gnu: python-scikit-learn: Update to 1.7.2.
discard 8a910f6ea1 gnu: python-nbval: Reduce closure size.
discard f6e5784168 gnu: python-pydantic-2: Deprecate by python-pydantic.
discard 4e23d0d390 gnu: Add python-pydantic-1.
discard 0bdacdcf44 gnu: python-pydantic: Update to 2.12.5.
discard ccf7a5166f gnu: python-pydantic-core: Update to 2.41.5.
discard ccb0cf092d gnu: Add python-pytest-run-parallel.
discard 689c686671 gnu: Add python-typing-inspection.
discard 9b6ccd1890 gnu: python-dask: Update to 2025.11.0.
discard 4bee8763d7 gnu: python-setuptools-scm-next: Undeprecate.
discard 341bca100c gnu: python-blosc: Adjust inputs.
discard 1393eb2487 gnu: python-h5py: Update to 3.15.1.
discard 1f1affefaa gnu: python-pytest-regressions: Move to python-check.
discard 3ce9ae8c51 gnu: python-pytest-regressions: Update to 2.8.3.
discard 12262f4539 gnu: python-scipy: Update to 1.16.3.
discard dc4f720e1d gnu: python-msgpack: Update to 1.1.2.
discard 43ecf5da80 gnu: python-pandas: Update to 2.3.3.
discard d737db8096 gnu: python-matplotlib: Update to 3.10.8.
discard cd14909936 gnu: python-httptools: Update to 0.7.1.
discard 17a49ddff0 gnu: python-numpy-2: Deprecate by python-numpy.
discard ed0cbfd1f0 gnu: python-numpy: Set NumPy 2 as default.
discard 2576d90a41 gnu: Add python-cython-next.
discard 71abac3ad0 gnu: python-cython: Update to 3.1.7.
discard 2013038890 gnu: Add python-setuptools-79.
add 52366256c4 gnu: qtwebengine: Enable vaapi.
add 3a44ef5472 gnu: shaderc-for-pcsx2: Remove.
add f25464b7d3 gnu: libpng-for-pcsx2: Rename package to libpng-next.
add a6b42e4a3b gnu: pcsx2-patches: Update to 2025.12.11-0.10239de.
add f98affddb4 gnu: pcsx2: Revise package.
add 6c0309adfa gnu: python-pyscroll: Update to 2.31-1.31e1c28.
add 54c880239d gnu: python-neteria: Switch to pyproject-build-system.
add 9c70ddf23e gnu: libxml++: Update to 5.6.0.
add 65f57fc74f gnu: stepmania: Fix compatibility with ffmpeg 8.
add 8aba80b2d0 gnu: oshu: Update to 2.0.3.
add 71c9ffd758 gnu: hyfetch: Update to 2.0.5.
add a63e421bdf gnu: sqlitestudio: Update to 3.4.19.
add 135ff24edb gnu: clifm: Update to 1.26.3.
new bad2818f9b gnu: Add python-setuptools-79.
new 569d485453 gnu: python-cython: Update to 3.1.7.
new c7d12bcb2b gnu: Add python-cython-next.
new 5547a76105 gnu: python-numpy: Set NumPy 2 as default.
new e7d6ce98e2 gnu: python-numpy-2: Deprecate by python-numpy.
new 23ece6dcc8 gnu: python-httptools: Update to 0.7.1.
new db688f2933 gnu: python-matplotlib: Update to 3.10.8.
new e2e46500aa gnu: python-pandas: Update to 2.3.3.
new 7eb07f3f6b gnu: python-msgpack: Update to 1.1.2.
new b7a2b70f37 gnu: python-scipy: Update to 1.16.3.
new 4b3234ff38 gnu: python-pytest-regressions: Update to 2.8.3.
new a47eb07c9a gnu: python-pytest-regressions: Move to python-check.
new df262bab0d gnu: python-h5py: Update to 3.15.1.
new dfc420a0f5 gnu: python-blosc: Adjust inputs.
new bab379c427 gnu: python-setuptools-scm-next: Undeprecate.
new c705a3c595 gnu: python-dask: Update to 2025.11.0.
new a676ceb69f gnu: Add python-typing-inspection.
new 03311e5422 gnu: Add python-pytest-run-parallel.
new 0aef91264c gnu: python-pydantic-core: Update to 2.41.5.
new 8458c572f5 gnu: python-pydantic: Update to 2.12.5.
new 8059c7ea31 gnu: Add python-pydantic-1.
new 71ea534675 gnu: python-pydantic-2: Deprecate by python-pydantic.
new d69d33d17f gnu: python-nbval: Reduce closure size.
new 9bf51b98a8 gnu: python-scikit-learn: Update to 1.7.2.
new 057ebae3a6 gnu: python-distributed: Update to 2025.11.0.
new 2b9e5aed10 gnu: python-numexpr: Update to 2.14.1.
new 3a421b3f5b gnu: python-ndindex: Update to 1.10.1.
new cbb509a410 gnu: c-blosc2: Update to 2.22.0.
new 8b15dd0282 gnu: python-blosc2: Update to 3.12.2.
new 62054fdfd6 gnu: netcdf: Update to 4.9.2.
new d801351f9d gnu: python-netcdf4: Update to 1.7.2.
new 5b77c00262 gnu: python-pydantic-settings: Update to 2.12.0.
new 695ff76aec gnu: python-casa-formats-io: Fix tests.
new 94dd54cd95 gnu: Add python-ulid.
new 119ffd814f gnu: Add python-cron-converter.
new b26b522740 gnu: Add python-annotated-doc.
new 6323ca4c5e gnu: Add python-pydantic-extra-types.
new 194b77283f gnu: python-fastapi: Update to 0.124.0.
new 19e245319c gnu: python-astropy-6: Skip some tests.
new e305a5c88a gnu: python-xmp-toolkit: Update to 2.1.0.
new 50b895a0ed gnu: python-django-ninja: Update to 1.5.1.
new f5031369e3 gnu: python-dendropy: Update to 5.0.8.
new 4e37ed5af7 gnu: python-algopy: Update to 0.7.2.
new 9380da6124 gnu: python-cloudpathlib: Fix tests.
new ebbcc9ef22 gnu: python-stwcs: Remove relax-requirements phase.
new 555bb05987 gnu: python-astroml: Fix build.
new 936836998d gnu: python-guardpost: Update to 1.0.4.
new ebab5dd076 gnu: Add python-py3exiv2.
new f09995afa5 gnu: didjvu: Update to 0.11.0.
new 23621698c5 gnu: python-blacksheep: Update to 2.4.5.
new a397b29a53 gnu: checkm: Update to 1.2.4.
new 3d59c313f0 gnu: blender: Use python-numpy@1.
new f0c76fe09c gnu: python-cesium: Update to 0.12.4.
new f1aaf64683 gnu: python-ctapipe: Update to 0.28.0.
new 454a3d4df5 gnu: python-nox: Update to 2025.11.12.
new 737216fc92 gnu: python-esutil: Fix build with gcc-14.
new a3e1a0fd45 gnu: genetic: Use python-pynbody@2.
new 8e4ba10f25 gnu: python-fgivenx: Update to 2.4.2-0.cf51dbf.
new bebd58c47b gnu: python-gwcs: Remove relax-requirements phase.
new b0d07d4bbd gnu: python-jwst: Remove relax-requirements phase.
new 284759d715 gnu: python-astrodata: Use python-numpy@1.
new 6a13a842df gnu: python-fits-schema: Update to 0.5.6-0.ccffe04.
new f3cfec0d91 gnu: python-scikit-image: Update to 0.25.2.
new 27249cf7cc gnu: python-scikit-image-next: Deprecate by
python-scikit-image.
new cc69aeeb29 gnu: python-statmorph: Adjust inputs.
new 8721930272 gnu: python-jacobi: Fix tests.
new 0a271e4e11 gnu: python-zodipy: Remove relax-requirements phase.
new 59c35f030e gnu: python-kanon: Use python-numpy@1.
new c81077818d gnu: python-linetools: Skip 2 tests.
new 1e65e4fe33 gnu: cpat: Update to 3.0.5.
new 69e49c2311 gnu: python-annoy: Add python-h5py.
new e4ac559bf2 gnu: python-tables: Update to 3.10.2-0.aad9079.
new 74a891d14d gnu: pyscenic: Update to 0.12.1-2.06bafba4.
new 3c26892d62 gnu: python-llvmlite: Update to 0.45.0.
new c53887bdf0 gnu: python-numba: Update to 0.62.1.
new 2954cf712d gnu: catch2: Update to 2.13.10.
new 008d9d5dff gnu: python-xarray: Update to 2025.12.0.
new d08541a389 gnu: python-dask-image: Update to 2025.11.0.
new b81405b971 gnu: python-reproject: Update to 0.19.0.
new daadc6eb9b gnu: python-spectral-cube: Update to 0.6.7.
new f17c20d787 gnu: python-xarray-einstats: Update to 0.9.1.
new 82339a597f gnu: python-naima: Update to 0.10.3.
new 48b676842a gnu: python-arboreto: Update to 0.1.6-0.79f916b.
new 94013883e4 gnu: python-arviz: Update to 0.22.0.
new f7e5d74666 gnu: python-cleanlab: Fix build.
new 3f964813ae gnu: python-pyopengl: Skip one test.
new e522074419 gnu: python-modin: Update to 0.37.1.
new 16460187f5 gnu: python-jwcrypto: Adjust inputs.
new 1591581af9 gnu: websockify: Update to 0.13.0.
new c40191f0b5 gnu: veusz: Update to 4.2.
new 7e128d9d43 gnu: python-seaborn: Skip 3 tests.
new b3e7d48ea3 gnu: python-glue-astronomy: Skip 3 tests.
new 576cdb5851 gnu: Add python-lofar-parameterset.
new 94f7871ac4 gnu: python-losoto: Update to 2.6.0.
new 704523927f gnu: python-lofar-h5plot: Use python-numpy@1.
new 7f0659bfae gnu: python-meshio: Skip some tests.
new 188e48bc62 gnu: python-numdifftools: Update to 0.9.42.
new 2bd7fd0879 gnu: python-sunkit-spex: Update to 0.4.0-0.bb544c4.
new a976127306 gnu: python-kalepy: Skip 5 tests.
new 3ffa99863d gnu: python-regions: Update to 0.11.
new 5ff280c496 gnu: python-romancal: Remove relax-requirements phase.
new 6490ca55d7 gnu: python-hnswlib: Update to 0.8.0.
new 621aae011e gnu: python-loompy: Update to 3.0.8.
new aaefbeaa9d gnu: urh: Use python-numpy@1.
new b880c2986a gnu: python-ase: Update to 3.26.0.
new 214456ec4c gnu: python-asap3: Update to 3.13.10.
new da885ba74d gnu: python-specutils: Remove relax-requirements phase.
new 54b3ad5fa0 gnu: python-jmespath: Switch to pyproject.
new 4e30be08f9 gnu: python-stcal: Adjust relax-requirments phase.
new 1da9c6ef24 gnu: python-pytest-randomly: Update to 4.0.1.
new e63fd9b792 gnu: python-pytest-randomly: Move to python-check.
new 318038ed85 gnu: python-pytest-doctestplus: Update to 1.6.0.
new 7e8887cfb3 gnu: python-pythran: Clean up artifacts.
new 5f46b90bf7 gnu: python-contourpy: Update to 1.3.3.
new e8fb817899 gnu: python-ipython: Update to 9.8.0.
new e91d89da6e gnu: Add python-ipython-minimal.
new 57f5056616 gnu: python-jupyter-core: Move to jupyter.
new 6458270040 gnu: python-jupyter-core: Update to 5.9.1.
new d35931144d gnu: python-jupyter-client: Simplfy bootstrapping.
new 3fa6e3ad6e gnu: python-jupyter-client: Move to jupyter.
new 8b5704a294 gnu: Remove python-jupyter-console-minimal.
new 8c08ca6b91 gnu: Add python-pytest-jupyter-minimal.
new beb15dff0b gnu: python-jupyter-client: Update to 8.7.0.
new 4f68079b3e gnu: python-ipykernel: Update to 7.1.0.
new cf8cc84350 gnu: python-jupyter-console: Update to 6.6.3.
new a84f2bd89c gnu: python-jupyter-console: Move to jupyter.
new 14edf5cff5 gnu: Add python-jupyter-client-7.
new d386c37a05 gnu: python-notebook: Fix build.
new 56800697d0 gnu: python-pycollada: Update to 0.9.2.
new 846d4f0cfb gnu: python-pynbody: Use python-ipython-minimal for tests.
new e15d0f9b7c gnu: crossmap: Update to 0.7.3.
new 7de455abfe gnu: python-awkward-cpp: Update to 47.
new b8cf15f0ee gnu: python-awkward: Update to 2.8.5.
new b668907c46 gnu: python-anndata: Update to 0.12.7.
new 9353013ea7 gnu: Add python-anndata-minimal.
new fd5a078862 gnu: python-biom-format: Update to 2.1.17.
new 05bee4a766 gnu: endgame-singularity: Update to 1.1.
new b5803e6f9c gnu: python-scikit-bio: Update to 0.7.1.post1.
new 650e563a0d gnu: Add python-diptest.
new 558e5f4a6b gnu: pyscenic: Add missing python-diptest.
new 077b2462b2 gnu: python-pandera: Update to 0.27.1.
new 333a93c79e gnu: python-fbpca: Fix tests.
new 94f67ab277 gnu: python-biopython: Update to 1.86.
new dd9982f728 gnu: python-statsmodels: Update to 0.14.5.
new 6a0fad3db0 gnu: python-scanpy: Update to 1.11.5.
new b1ef2585e7 gnu: python-circe: Update to 0.3.9.
new c7a6f13a82 gnu: python-cooler: Update to 0.10.4.
new 78a5e14a02 gnu: python-coolbox: Update to 0.3.9.
new 871e735b95 gnu: htseq: Update to 2.0.9.
new f7f0608ee9 gnu: python-vaex-core: Update to 4.19.0.
new cb1e9cd730 gnu: python-jupyterlab-widgets: Update to 3.0.12.
new 4a2d057a42 gnu: python-ipywidgets: Update to 8.1.4.
new 047dd4afa9 gnu: Add python-array-api-strict.
new 67e1058464 gnu: python-plotly: Update to 5.24.1.
new 51cfe9d560 gnu: python-pyudev: Update to 0.24.4.
new cd4d73cb03 gnu: python-numpoly: Update to 1.3.4.
new e0747823de gnu: python-chaospy: Update to 4.3.21.
new 789d8c48bb gnu: tangos: Update to 1.11.0.
new a9b0e22d8b gnu: Remove python-eventio-1.
new 17b8d1869c gnu: Add qdldl.
new 913f770e98 gnu: Add osqp.
new a07538f125 gnu: python-osqp: Update to 1.0.5.
new baaf02fa76 gnu: Add scs.
new a9f06bfe7b gnu: python-scs: Update to 3.2.10.
new 8a1514fddc gnu: python-cvxpy: Update to 1.7.5.
new 64be29fbc4 gnu: python-fastcluster: Update to 1.3.0.
new c8ed69ce18 gnu: Add python-lsprotocol.
new aec9a9ec4c gnu: Add python-pygls.
new 3adfe005f7 gnu: python-crosshair: Update to 0.0.101.
new a062c098b0 gnu: python-metacells: Simplify.
new 8e84f9ce8f gnu: python-verde: Update to 1.8.1.
new 04a3609f77 gnu: Add python-pyunlocbox.
new e4c80bbe99 gnu: python-pygsp: Update to 0.6.0.
new 60febd7055 gnu: python-graphtools: Update to 2.1.0.
new 77cc0dc53b gnu: python-fcsparser: Use python-numpy@1.
new ca6a1a6878 gnu: Add python-scprep.
new 3e51c592d8 gnu: python-magic-impute: Update to 3.0.0.
new 937764bed0 gnu: python-cooltools: Update to 0.7.1.
new cc9f3d48ba gnu: python-cnmf: Update to 1.7.0.
new 21adc83ef9 gnu: idr: Fix build.
new 74aca9f992 gnu: mageck: Use python-numpy@1.
new 060c57ce5a gnu: python-captum: Update to 0.8.0-0.4fade3a.
new 97dc1da0f7 gnu: python-cellbender: Update to 0.3.2.
new 4036ddc7d6 gnu: macs-3: Update to 3.0.3.
new d8cc0b1b62 gnu: python-brian2: Update to 2.10.1.
new b38e5c6a7f gnu: python-presto: Improve package, fix tests.
new c534607410 gnu: Add python-apricot-select.
new 3a4c1d4544 gnu: python-pomegranate: Update to 1.1.0.
new 9ba5474f9b gnu: python-pomegranate: Move to machine-learning.
new 6918082902 gnu: python-pyfaidx: Update to 0.9.0.3.
new 9796c8d5e8 gnu: cnvkit: Update to 0.9.12-0.52f367b.
new 3638d23112 gnu: piglit: Use python-numpy@1.
new 87f060a7c5 gnu: python-tdda: Skip one more test.
new 65a012ec67 gnu: python-deepdish: Use python-numpy@1.
new 1ac3d4cc0a gnu: python-deeptools: Update to 3.5.6.
new 5eb0f714de gnu: python-funsor: Update to 0.4.6.
This update added new revisions after undoing existing revisions.
That is to say, some revisions that were in the old version of the
branch are not in the new version. This situation occurs
when a user --force pushes a change and generates a repository
containing something like this:
* -- * -- B -- O -- O -- O (fdc2a59f34)
\
N -- N -- N refs/heads/python-team (5eb0f714de)
You should already have received notification emails for all of the O
revisions, and so the following emails describe only the N revisions
from the common base, B.
Any revisions marked "omit" are not gone; other references still
refer to them. Any revisions marked "discard" are gone forever.
The 196 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "add" were already present in the repository and have only
been added to this reference.
Summary of changes:
gnu/local.mk | 1 -
gnu/packages/admin.scm | 9 +-
gnu/packages/clifm.scm | 4 +-
gnu/packages/databases.scm | 4 +-
gnu/packages/emulators.scm | 150 ++++--
gnu/packages/game-development.scm | 45 +-
gnu/packages/games.scm | 8 +-
gnu/packages/gnome.scm | 4 +-
gnu/packages/image.scm | 2 +-
gnu/packages/machine-learning.scm | 102 +++-
.../patches/shaderc-for-pcsx2-changes.patch | 543 ---------------------
gnu/packages/patches/stepmania-ffmpeg-compat.patch | 47 +-
gnu/packages/python-science.scm | 4 +-
gnu/packages/qt.scm | 8 +-
gnu/packages/vulkan.scm | 16 -
15 files changed, 286 insertions(+), 661 deletions(-)
delete mode 100644 gnu/packages/patches/shaderc-for-pcsx2-changes.patch
