guix_mirror_bot pushed a change to branch python-team
in repository guix.
discard 01e613271f gnu: scvelo: Update to 0.3.3.
discard c6b3a06b53 gnu: python-hic2cool: Fix tests.
discard fb487e1dd0 gnu: python-hdf5storage: Use pythno-numpy@1.
discard 5e579c256a gnu: python-dcor: Use python-numpy@1.
discard 4425d43e61 gnu: coda: Use python-numpy@1.
discard 5b96326367 gnu: dolphin-emu: Use python-numpy@1.
discard e1d16488f5 gnu: Remove python-statannot.
discard cc949b9559 gnu: Add python-statannotations.
discard ccaca15cf9 gnu: python-scikit-surprise: Use python-numpy@1.
discard 8eaf02df12 gnu: python-spisea: Use python-numpy@1.
discard b59927c7b0 gnu: python-pysynphot: Update to 2.0.0-1.a5e76c3.
discard 4dff586083 gnu: python-paramz Move to machinve-learning.
discard b049abcc8d gnu: python-gpy: Use python-numpy@1.
discard b3268bb3d0 gnu: python-paramz: Use python-numpy@1.
discard 1d9e7d5986 gnu: rdkit: Use python-numpy@1.
discard cc3f4d1416 gnu: boost-numpy: Use python-numpy@1.
discard b062cab263 gnu: python-scikit-learn-1.6: Skip 3 more tests.
discard 93cb610ff9 gnu: python-vector: Update to 1.7.0.
discard 55949bf2d7 gnu: python-papermill: Reduce closure size; skip 2 tests.
discard 44b8f47395 gnu: python-glue-qt: Relax requirements for ipython version.
discard 2cbd23663e gnu: Remove python-xarray-datatree.
discard d17b78bd15 gnu: python-multiscale-spatial-image: Update to 2.0.3.
discard fd462947ce gnu: Add python-xarray-dataclass.
discard 61a4b9e167 gnu: python-fenics-ffc: Use python-numpy@1.
discard a5d3f6c0b5 gnu: python-fenics-ufl-2019: Use python-numpy@1.
discard b4e39acd71 gnu: python-episcanpy: Use python-numpy@1.
discard 81eca3b776 gnu: python-utilities-awetzel: Remove relax-requirements
phase.
discard c6e8cd7060 gnu: python-specreduce: Remove relax-requirements phase.
discard 19be14b4e3 gnu: python-sncosmo: Adjust phases.
discard 54d0cdacf9 gnu: python-sep: Remove relax-requirements phase.
discard d7e579c7cb gnu: python-gizmo-analysis: Remove relax-requirements phase.
discard 3f8c44eeba gnu: python-drizzlepac: Update to 3.10.0-0.e01563c.
discard aff29c1d04 gnu: Add python-stregion.
discard 732cba9d88 gnu: python-drep: Update to 3.6.2-0.7b4b8fb.
discard e30fb167c1 gnu: python-mygene: Switch to pyproject.
discard 8495626a4b gnu: python-funsor: Update to 0.4.6.
discard f47395e74d gnu: python-deeptools: Update to 3.5.6.
discard 301c8872fc gnu: python-deepdish: Use python-numpy@1.
discard dd437a4d68 gnu: python-tdda: Skip one more test.
discard c71a33b9fd gnu: piglit: Use python-numpy@1.
discard 52312cb358 gnu: cnvkit: Update to 0.9.12-0.52f367b.
discard aa9aba9607 gnu: python-pyfaidx: Update to 0.9.0.3.
discard 89b37a8c72 gnu: python-pomegranate: Move to machine-learning.
discard 1631e8f72d gnu: python-pomegranate: Update to 1.1.0.
discard 99191f7173 gnu: Add python-apricot-select.
discard 37b6abfd99 gnu: python-presto: Improve package, fix tests.
discard cc956152a6 gnu: python-brian2: Update to 2.10.1.
discard 2fca0d684b gnu: macs-3: Update to 3.0.3.
discard f0a30d0f0c gnu: python-cellbender: Update to 0.3.2.
discard e12cd86d99 gnu: python-captum: Update to 0.8.0-0.4fade3a.
discard 3c86c72c44 gnu: mageck: Use python-numpy@1.
discard dcc0c432fa gnu: idr: Fix build.
discard 6a0f7391d6 gnu: python-cnmf: Update to 1.7.0.
discard 3b283018e9 gnu: python-cooltools: Update to 0.7.1.
discard 9f302bffef gnu: python-magic-impute: Update to 3.0.0.
discard 6bdeafdbc6 gnu: Add python-scprep.
discard a24bab40b3 gnu: python-fcsparser: Use python-numpy@1.
discard 06323c968a gnu: python-graphtools: Update to 2.1.0.
discard 15412d27ff gnu: python-pygsp: Update to 0.6.0.
discard 9028b86384 gnu: Add python-pyunlocbox.
discard c1693ca7ef gnu: python-verde: Update to 1.8.1.
discard fef3de1edd gnu: python-metacells: Simplify.
discard 62e1c8fe5c gnu: python-crosshair: Update to 0.0.101.
discard 224cb6467f gnu: Add python-pygls.
discard c8beec4bd4 gnu: Add python-lsprotocol.
discard 27570abbc7 gnu: python-fastcluster: Update to 1.3.0.
discard ff1804a223 gnu: python-cvxpy: Update to 1.7.5.
discard aaf4947a68 gnu: python-scs: Update to 3.2.10.
discard 3ab6ff050e gnu: Add scs.
discard f87947f2c2 gnu: python-osqp: Update to 1.0.5.
discard 88f4b00260 gnu: Add osqp.
discard 6e374503a9 gnu: Add qdldl.
discard 091cbcca84 gnu: Remove python-eventio-1.
discard 4e060ac55b gnu: tangos: Update to 1.11.0.
discard 9ae36ec606 gnu: python-chaospy: Update to 4.3.21.
discard 4645dd0d0c gnu: python-numpoly: Update to 1.3.4.
discard 775ab72a52 gnu: python-pyudev: Update to 0.24.4.
discard 0fde2af5bb gnu: python-plotly: Update to 5.24.1.
discard 7d9169f6f4 gnu: Add python-array-api-strict.
discard 74cac9168d gnu: python-ipywidgets: Update to 8.1.4.
discard 02a38f47fe gnu: python-jupyterlab-widgets: Update to 3.0.12.
discard d3b91f24dc gnu: python-vaex-core: Update to 4.19.0.
discard 2ba11d527c gnu: htseq: Update to 2.0.9.
discard 45e49b1473 gnu: python-coolbox: Update to 0.3.9.
discard 1d90388aac gnu: python-cooler: Update to 0.10.4.
discard ada84ecc1b gnu: python-circe: Update to 0.3.9.
discard 7abb7f66cd gnu: python-scanpy: Update to 1.11.5.
discard 2236f4cd0b gnu: python-statsmodels: Update to 0.14.5.
discard 5c27a1b513 gnu: python-biopython: Update to 1.86.
discard 7876589a47 gnu: python-fbpca: Fix tests.
discard 367b156f3c gnu: python-pandera: Update to 0.27.1.
discard 730648b926 gnu: pyscenic: Add missing python-diptest.
discard ae050871f2 gnu: Add python-diptest.
discard 01a6e15b68 gnu: python-scikit-bio: Update to 0.7.1.post1.
discard 9d4f5c188f gnu: endgame-singularity: Update to 1.1.
discard 6bcceae64f gnu: python-biom-format: Update to 2.1.17.
discard f96d730a3c gnu: Add python-anndata-minimal.
discard 370daadecc gnu: python-anndata: Update to 0.12.7.
discard 2ebce26999 gnu: python-awkward: Update to 2.8.5.
discard e7fbf0d44e gnu: python-awkward-cpp: Update to 47.
discard 0729bb7f1b gnu: crossmap: Update to 0.7.3.
discard 804a6628f1 gnu: python-pynbody: Use python-ipython-minimal for tests.
discard 5918b1bbbe gnu: python-pycollada: Update to 0.9.2.
discard 75364aade8 gnu: python-notebook: Fix build.
discard ccedcaf1a1 gnu: Add python-jupyter-client-7.
discard 458609b881 gnu: python-jupyter-console: Move to jupyter.
discard eee70d7a09 gnu: python-jupyter-console: Update to 6.6.3.
discard 34edc3f05c gnu: python-ipykernel: Update to 7.1.0.
discard e884c21b17 gnu: python-jupyter-client: Update to 8.7.0.
discard 5bcc73585c gnu: Add python-pytest-jupyter-minimal.
discard 170f428121 gnu: Remove python-jupyter-console-minimal.
discard 0afc4608a5 gnu: python-jupyter-client: Move to jupyter.
discard 23d5e54b8f gnu: python-jupyter-client: Simplfy bootstrapping.
discard 2a6c9c8c9d gnu: python-jupyter-core: Update to 5.9.1.
discard bbca0def1e gnu: python-jupyter-core: Move to jupyter.
discard aa7ef13028 gnu: Add python-ipython-minimal.
discard 9b86d791f3 gnu: python-ipython: Update to 9.8.0.
discard 5f2baa8509 gnu: python-contourpy: Update to 1.3.3.
discard 9e8f2634cb gnu: python-pythran: Clean up artifacts.
discard bd813c5948 gnu: python-pytest-doctestplus: Update to 1.6.0.
discard c389d5d9d4 gnu: python-pytest-randomly: Move to python-check.
discard dada58b94b gnu: python-pytest-randomly: Update to 4.0.1.
discard 0f7ee9d421 gnu: python-stcal: Adjust relax-requirments phase.
discard aabe2bd13a gnu: python-jmespath: Switch to pyproject.
discard 234d28dd08 gnu: python-specutils: Remove relax-requirements phase.
discard aa208a7315 gnu: python-asap3: Update to 3.13.10.
discard b58a77128d gnu: python-ase: Update to 3.26.0.
discard d273a8b314 gnu: urh: Use python-numpy@1.
discard af439735d3 gnu: python-loompy: Update to 3.0.8.
discard ff14631564 gnu: python-hnswlib: Update to 0.8.0.
discard d4a8bdd6e4 gnu: python-romancal: Remove relax-requirements phase.
discard d25f438716 gnu: python-regions: Update to 0.11.
discard 5490aa2c81 gnu: python-kalepy: Skip 5 tests.
discard ef77dd138e gnu: python-sunkit-spex: Update to 0.4.0-0.bb544c4.
discard 6882d9212e gnu: python-numdifftools: Update to 0.9.42.
discard bd471ac448 gnu: python-meshio: Skip some tests.
discard c04e56432b gnu: python-lofar-h5plot: Use python-numpy@1.
discard f284a77c8b gnu: python-losoto: Update to 2.6.0.
discard 967117b38f gnu: Add python-lofar-parameterset.
discard 03cd1bcd20 gnu: python-glue-astronomy: Skip 3 tests.
discard 0debcf2e10 gnu: python-seaborn: Skip 3 tests.
discard da2c2f0639 gnu: veusz: Update to 4.2.
discard ef168050c6 gnu: websockify: Update to 0.13.0.
discard d0b989410b gnu: python-jwcrypto: Adjust inputs.
discard 4216e920c6 gnu: python-modin: Update to 0.37.1.
discard 8b54f010aa gnu: python-pyopengl: Skip one test.
discard a2d9a050ad gnu: python-cleanlab: Fix build.
discard 342296bdd9 gnu: python-arviz: Update to 0.22.0.
discard 661acb0d9b gnu: python-arboreto: Update to 0.1.6-0.79f916b.
discard b1d416f7f0 gnu: python-naima: Update to 0.10.3.
discard b30adf3bb5 gnu: python-xarray-einstats: Update to 0.9.1.
discard 227572890e gnu: python-spectral-cube: Update to 0.6.7.
discard 577ae8a272 gnu: python-reproject: Update to 0.19.0.
discard 0c8e93db4c gnu: python-dask-image: Update to 2025.11.0.
discard ef9578d91a gnu: python-xarray: Update to 2025.12.0.
discard 0134ba9a80 gnu: catch2: Update to 2.13.10.
discard 8a02495771 gnu: python-numba: Update to 0.62.1.
discard c2f6699b18 gnu: python-llvmlite: Update to 0.45.0.
discard 382ceac0a8 gnu: pyscenic: Update to 0.12.1-2.06bafba4.
discard 2bcc19fa42 gnu: python-tables: Update to 3.10.2-0.aad9079.
discard 4b86028403 gnu: python-annoy: Add python-h5py.
discard 4c48bca22a gnu: cpat: Update to 3.0.5.
discard d0964016cb gnu: python-linetools: Skip 2 tests.
discard badc2ca7a9 gnu: python-kanon: Use python-numpy@1.
discard a9a28f5c5e gnu: python-zodipy: Remove relax-requirements phase.
discard 073c5ffddb gnu: python-jacobi: Fix tests.
discard 7959dd04d2 gnu: python-statmorph: Adjust inputs.
discard 06146a582c gnu: python-scikit-image-next: Deprecate by
python-scikit-image.
discard 0f626e4cfc gnu: python-scikit-image: Update to 0.25.2.
discard eb616b8f27 gnu: python-fits-schema: Update to 0.5.6-0.ccffe04.
discard 11f0700e92 gnu: python-astrodata: Use python-numpy@1.
discard ae2b6aaa36 gnu: python-jwst: Remove relax-requirements phase.
discard 63402e9d2a gnu: python-gwcs: Remove relax-requirements phase.
discard bc6ace8da9 gnu: python-fgivenx: Update to 2.4.2-0.cf51dbf.
discard d2434c9f0f gnu: genetic: Use python-pynbody@2.
discard f36d35d6a7 gnu: python-esutil: Fix build with gcc-14.
discard f0db9b6bd1 gnu: python-nox: Update to 2025.11.12.
discard 4eed26057c gnu: python-ctapipe: Update to 0.28.0.
discard 1ca6b30b62 gnu: python-cesium: Update to 0.12.4.
discard 5da5309e7e gnu: blender: Use python-numpy@1.
discard 4c14d7a88f gnu: checkm: Update to 1.2.4.
discard 29a990c854 gnu: python-blacksheep: Update to 2.4.5.
discard 891871dd9f gnu: didjvu: Update to 0.11.0.
discard b497db5cc3 gnu: Add python-py3exiv2.
discard 4f371ed3a8 gnu: python-guardpost: Update to 1.0.4.
discard 4a54ba1bfd gnu: python-astroml: Fix build.
discard 6a82cc09c5 gnu: python-stwcs: Remove relax-requirements phase.
discard d1d72d0d9d gnu: python-cloudpathlib: Fix tests.
discard a0ee545e5f gnu: python-algopy: Update to 0.7.2.
discard ba36c8fca3 gnu: python-dendropy: Update to 5.0.8.
discard c2f07e0064 gnu: python-django-ninja: Update to 1.5.1.
discard b10c5e9cc4 gnu: python-xmp-toolkit: Update to 2.1.0.
discard 046fb59623 gnu: python-astropy-6: Skip some tests.
discard 71e4522839 gnu: python-fastapi: Update to 0.124.0.
discard 43fafc6c23 gnu: Add python-pydantic-extra-types.
discard 6476b699df gnu: Add python-annotated-doc.
discard 0ef745a89d gnu: Add python-cron-converter.
discard 1486246a03 gnu: Add python-ulid.
discard 19d4621927 gnu: python-casa-formats-io: Fix tests.
discard 2e462fc002 gnu: python-pydantic-settings: Update to 2.12.0.
discard 1e3d819200 gnu: python-netcdf4: Update to 1.7.2.
discard a63e80c1d1 gnu: netcdf: Update to 4.9.2.
discard 7410d5d365 gnu: python-blosc2: Update to 3.12.2.
discard f361b2f4e2 gnu: c-blosc2: Update to 2.22.0.
discard b7dc0c65e6 gnu: python-ndindex: Update to 1.10.1.
discard 8f38429372 gnu: python-numexpr: Update to 2.14.1.
discard 65cb1172e6 gnu: python-distributed: Update to 2025.11.0.
discard 9c5cfac29d gnu: python-scikit-learn: Update to 1.7.2.
discard a5faca2486 gnu: python-nbval: Reduce closure size.
discard 52218eab44 gnu: python-pydantic-2: Deprecate by python-pydantic.
discard 8914b4e6f3 gnu: Add python-pydantic-1.
discard 8ea021c73d gnu: python-pydantic: Update to 2.12.5.
discard 8b5b25f6d7 gnu: python-pydantic-core: Update to 2.41.5.
discard 2f8580d4ea gnu: Add python-pytest-run-parallel.
discard 5328b9eb83 gnu: Add python-typing-inspection.
discard 198d8642f0 gnu: python-dask: Update to 2025.11.0.
discard 85078b6fa3 gnu: python-setuptools-scm-next: Undeprecate.
discard 62d3b03a3a gnu: python-blosc: Adjust inputs.
discard 2edaf7a274 gnu: python-h5py: Update to 3.15.1.
discard 659ebb26e9 gnu: python-pytest-regressions: Move to python-check.
discard 27eac0f223 gnu: python-pytest-regressions: Update to 2.8.3.
discard 4ddc471820 gnu: python-scipy: Update to 1.16.3.
discard 41c212dabb gnu: python-msgpack: Update to 1.1.2.
discard 39a071e2da gnu: python-pandas: Update to 2.3.3.
discard 55099e6fca gnu: python-matplotlib: Update to 3.10.8.
discard 7ea2fe57df gnu: python-httptools: Update to 0.7.1.
discard e7f8e7599d gnu: python-numpy-2: Deprecate by python-numpy.
discard 6564d5b659 gnu: python-numpy: Set NumPy 2 as default.
discard b7b4659022 gnu: Add python-cython-next.
discard e90b1d0784 gnu: python-cython: Update to 3.1.7.
discard 7914a53d5d gnu: Add python-setuptools-79.
add 06d72239c1 gnu: u-boot-tools: Fix cross-compilation.
new bcea99116e gnu: Add python-setuptools-79.
new 2e14137fea gnu: python-cython: Update to 3.1.7.
new 1e2b626b73 gnu: Add python-cython-next.
new 4300a2eefc gnu: python-numpy: Set NumPy 2 as default.
new b6332052d8 gnu: python-numpy-2: Deprecate by python-numpy.
new 7a66375a81 gnu: python-httptools: Update to 0.7.1.
new eb4a88b101 gnu: python-matplotlib: Update to 3.10.8.
new fda0c02745 gnu: python-pandas: Update to 2.3.3.
new 3b525e6d45 gnu: python-msgpack: Update to 1.1.2.
new 552bb56b95 gnu: python-scipy: Update to 1.16.3.
new dab8acf881 gnu: python-pytest-regressions: Update to 2.8.3.
new 3064002586 gnu: python-pytest-regressions: Move to python-check.
new a22380e06f gnu: python-h5py: Update to 3.15.1.
new 8b90540ae4 gnu: python-blosc: Adjust inputs.
new a58ce615e4 gnu: python-setuptools-scm-next: Undeprecate.
new 164da8531d gnu: python-dask: Update to 2025.11.0.
new 3f3d117ce6 gnu: Add python-typing-inspection.
new a83f2e2e0a gnu: Add python-pytest-run-parallel.
new c5b87cf68d gnu: python-pydantic-core: Update to 2.41.5.
new f61ea74704 gnu: python-pydantic: Update to 2.12.5.
new 81bad40309 gnu: Add python-pydantic-1.
new e1951432c4 gnu: python-pydantic-2: Deprecate by python-pydantic.
new f756465c0c gnu: python-nbval: Reduce closure size.
new e1ea8f92f7 gnu: python-scikit-learn: Update to 1.7.2.
new 6f6cbe3f74 gnu: python-distributed: Update to 2025.11.0.
new 2542a07ed6 gnu: python-numexpr: Update to 2.14.1.
new 2d8ad0e5b8 gnu: python-ndindex: Update to 1.10.1.
new 7344614bba gnu: c-blosc2: Update to 2.22.0.
new 795eb90c8c gnu: python-blosc2: Update to 3.12.2.
new a238282b86 gnu: netcdf: Update to 4.9.2.
new c00dfbba13 gnu: python-netcdf4: Update to 1.7.2.
new 7de46c6b2e gnu: python-pydantic-settings: Update to 2.12.0.
new 1158435fe1 gnu: python-casa-formats-io: Fix tests.
new 99017d5a1c gnu: Add python-ulid.
new 2d7bac5a7c gnu: Add python-cron-converter.
new d40e8496cd gnu: Add python-annotated-doc.
new 1144e1b12f gnu: Add python-pydantic-extra-types.
new 250603916e gnu: python-fastapi: Update to 0.124.0.
new f4b9c498f5 gnu: python-astropy-6: Skip some tests.
new 2f497867ab gnu: python-xmp-toolkit: Update to 2.1.0.
new 22485fb6ce gnu: python-django-ninja: Update to 1.5.1.
new 12016023cd gnu: python-dendropy: Update to 5.0.8.
new d9d46f0a77 gnu: python-algopy: Update to 0.7.2.
new c6ab7f0afd gnu: python-cloudpathlib: Fix tests.
new 824c6f009f gnu: python-stwcs: Remove relax-requirements phase.
new ac240c6b1c gnu: python-astroml: Fix build.
new 174bed476c gnu: python-guardpost: Update to 1.0.4.
new db97458048 gnu: Add python-py3exiv2.
new a70359d7e9 gnu: didjvu: Update to 0.11.0.
new af74706759 gnu: python-blacksheep: Update to 2.4.5.
new 454f349228 gnu: checkm: Update to 1.2.4.
new 24d76a3218 gnu: blender: Use python-numpy@1.
new 96d008b917 gnu: python-cesium: Update to 0.12.4.
new 47b5bd0ce3 gnu: python-ctapipe: Update to 0.28.0.
new 00baa08824 gnu: python-nox: Update to 2025.11.12.
new 3666b7cc65 gnu: python-esutil: Fix build with gcc-14.
new 6e148cd300 gnu: genetic: Use python-pynbody@2.
new 2f4a7b7d45 gnu: python-fgivenx: Update to 2.4.2-0.cf51dbf.
new f104d5ca4a gnu: python-gwcs: Remove relax-requirements phase.
new c82d977a94 gnu: python-jwst: Remove relax-requirements phase.
new 2ca2328b24 gnu: python-astrodata: Use python-numpy@1.
new 3e926061ea gnu: python-fits-schema: Update to 0.5.6-0.ccffe04.
new 496afc9bc2 gnu: python-scikit-image: Update to 0.25.2.
new 00ce7fade1 gnu: python-scikit-image-next: Deprecate by
python-scikit-image.
new 27bf207be5 gnu: python-statmorph: Adjust inputs.
new 3dd9e4743a gnu: python-jacobi: Fix tests.
new aa87f5ccb5 gnu: python-zodipy: Remove relax-requirements phase.
new 9bb42d3dee gnu: python-kanon: Use python-numpy@1.
new 0768028d5b gnu: python-linetools: Skip 2 tests.
new c6a4029cbb gnu: cpat: Update to 3.0.5.
new 5c851ef4bf gnu: python-annoy: Add python-h5py.
new dc26869147 gnu: python-tables: Update to 3.10.2-0.aad9079.
new 76b8b2fc42 gnu: pyscenic: Update to 0.12.1-2.06bafba4.
new 191e334b30 gnu: python-llvmlite: Update to 0.45.0.
new 9756b4d237 gnu: python-numba: Update to 0.62.1.
new b23179486c gnu: catch2: Update to 2.13.10.
new d74edf5216 gnu: python-xarray: Update to 2025.12.0.
new 957890c4e8 gnu: python-dask-image: Update to 2025.11.0.
new 69414447d6 gnu: python-reproject: Update to 0.19.0.
new 9927e2a6d4 gnu: python-spectral-cube: Update to 0.6.7.
new bfc8881d58 gnu: python-xarray-einstats: Update to 0.9.1.
new dcd1ba61dd gnu: python-naima: Update to 0.10.3.
new 40e17385d0 gnu: python-arboreto: Update to 0.1.6-0.79f916b.
new b9d4eff846 gnu: python-arviz: Update to 0.22.0.
new 8962817e5f gnu: python-cleanlab: Fix build.
new 7f3e5ff30b gnu: python-pyopengl: Skip one test.
new b60bbef85a gnu: python-modin: Update to 0.37.1.
new b653aba4c1 gnu: python-jwcrypto: Adjust inputs.
new d26b685d07 gnu: websockify: Update to 0.13.0.
new e3cc24fd9a gnu: veusz: Update to 4.2.
new ff47d1ff36 gnu: python-seaborn: Skip 3 tests.
new 9dc07ea88f gnu: python-glue-astronomy: Skip 3 tests.
new b6f997c8bb gnu: Add python-lofar-parameterset.
new 734db6bd71 gnu: python-losoto: Update to 2.6.0.
new 2e8d82fd24 gnu: python-lofar-h5plot: Use python-numpy@1.
new dd966491a4 gnu: python-meshio: Skip some tests.
new fdc6340356 gnu: python-numdifftools: Update to 0.9.42.
new 7f21762c89 gnu: python-sunkit-spex: Update to 0.4.0-0.bb544c4.
new 716b5012cc gnu: python-kalepy: Skip 5 tests.
new 09927bcd83 gnu: python-regions: Update to 0.11.
new 17e5334a92 gnu: python-romancal: Remove relax-requirements phase.
new 28dd0d26d4 gnu: python-hnswlib: Update to 0.8.0.
new b46277e1f6 gnu: python-loompy: Update to 3.0.8.
new 1b16f4797a gnu: urh: Use python-numpy@1.
new b17a093b8b gnu: python-ase: Update to 3.26.0.
new b3b418367a gnu: python-asap3: Update to 3.13.10.
new 55dc5912d0 gnu: python-specutils: Remove relax-requirements phase.
new c1b49ef61f gnu: python-jmespath: Switch to pyproject.
new 421dbfab8a gnu: python-stcal: Adjust relax-requirments phase.
new 415c780ded gnu: python-pytest-randomly: Update to 4.0.1.
new 57db049e24 gnu: python-pytest-randomly: Move to python-check.
new 5182df8f8f gnu: python-pytest-doctestplus: Update to 1.6.0.
new 8c760a12b3 gnu: python-pythran: Clean up artifacts.
new 00ae3d2358 gnu: python-contourpy: Update to 1.3.3.
new 71fecc7332 gnu: python-ipython: Update to 9.8.0.
new a8e1c90892 gnu: Add python-ipython-minimal.
new 7b0d78a955 gnu: python-jupyter-core: Move to jupyter.
new a5f6195ed3 gnu: python-jupyter-core: Update to 5.9.1.
new ca65d116b6 gnu: python-jupyter-client: Simplfy bootstrapping.
new e530b1cec3 gnu: python-jupyter-client: Move to jupyter.
new b61a1e8935 gnu: Remove python-jupyter-console-minimal.
new bdb9e210f5 gnu: Add python-pytest-jupyter-minimal.
new 5a6f2fcd92 gnu: python-jupyter-client: Update to 8.7.0.
new 8f3109c6c7 gnu: python-ipykernel: Update to 7.1.0.
new c8035aa416 gnu: python-jupyter-console: Update to 6.6.3.
new 4073b7dd53 gnu: python-jupyter-console: Move to jupyter.
new 8d5fd139ae gnu: Add python-jupyter-client-7.
new e6fe63a8ca gnu: python-notebook: Fix build.
new 291574ef1f gnu: python-pycollada: Update to 0.9.2.
new 21af078be6 gnu: python-pynbody: Use python-ipython-minimal for tests.
new b42e75f679 gnu: crossmap: Update to 0.7.3.
new 9c705118dc gnu: python-awkward-cpp: Update to 47.
new e67e39f087 gnu: python-awkward: Update to 2.8.5.
new fcf2275b5e gnu: python-anndata: Update to 0.12.7.
new 1b4f38b6ed gnu: Add python-anndata-minimal.
new 2d1ab47249 gnu: python-biom-format: Update to 2.1.17.
new 45b0640c4d gnu: endgame-singularity: Update to 1.1.
new 2f30bd1160 gnu: python-scikit-bio: Update to 0.7.1.post1.
new 58f5b945d4 gnu: Add python-diptest.
new 7512f3c347 gnu: pyscenic: Add missing python-diptest.
new 6a3d60751f gnu: python-pandera: Update to 0.27.1.
new dc855708b8 gnu: python-fbpca: Fix tests.
new 714bd30b6c gnu: python-biopython: Update to 1.86.
new 83ee87b10f gnu: python-statsmodels: Update to 0.14.5.
new c442047a0e gnu: python-scanpy: Update to 1.11.5.
new 08b05c0e7c gnu: python-circe: Update to 0.3.9.
new bb698a70ca gnu: python-cooler: Update to 0.10.4.
new 808ddad7cd gnu: python-coolbox: Update to 0.3.9.
new f9f5a6d1b9 gnu: htseq: Update to 2.0.9.
new bbaefb9860 gnu: python-vaex-core: Update to 4.19.0.
new 28f8b33aea gnu: python-jupyterlab-widgets: Update to 3.0.12.
new 950ce69808 gnu: python-ipywidgets: Update to 8.1.4.
new bb19ac7fee gnu: Add python-array-api-strict.
new 568eb23042 gnu: python-plotly: Update to 5.24.1.
new 028d20fbd6 gnu: python-pyudev: Update to 0.24.4.
new 3f4be33029 gnu: python-numpoly: Update to 1.3.4.
new 95e607468d gnu: python-chaospy: Update to 4.3.21.
new d24e5d1074 gnu: tangos: Update to 1.11.0.
new 97ca5a188d gnu: Remove python-eventio-1.
new 45f4f999de gnu: Add qdldl.
new fb427df3d3 gnu: Add osqp.
new 1d7fa95499 gnu: python-osqp: Update to 1.0.5.
new 520337eb51 gnu: Add scs.
new a89485e92e gnu: python-scs: Update to 3.2.10.
new fd2ac9ddd8 gnu: python-cvxpy: Update to 1.7.5.
new 9496f29558 gnu: python-fastcluster: Update to 1.3.0.
new e356d4d4f6 gnu: Add python-lsprotocol.
new d78eb9be54 gnu: Add python-pygls.
new 210dd1ad5b gnu: python-crosshair: Update to 0.0.101.
new a1dc9a9067 gnu: python-metacells: Simplify.
new 696cec6823 gnu: python-verde: Update to 1.8.1.
new e5e8ec4d11 gnu: Add python-pyunlocbox.
new 0d8f50dc0c gnu: python-pygsp: Update to 0.6.0.
new 04bb57730d gnu: python-graphtools: Update to 2.1.0.
new 93e47dcf4d gnu: python-fcsparser: Use python-numpy@1.
new 9d530a617b gnu: Add python-scprep.
new bc599da873 gnu: python-magic-impute: Update to 3.0.0.
new afbfb6650d gnu: python-cooltools: Update to 0.7.1.
new a167377f49 gnu: python-cnmf: Update to 1.7.0.
new 5ee0c567ed gnu: idr: Fix build.
new f57e362c10 gnu: mageck: Use python-numpy@1.
new 9b454cd792 gnu: python-captum: Update to 0.8.0-0.4fade3a.
new fbc15c2bb4 gnu: python-cellbender: Update to 0.3.2.
new 5a2a0b4f65 gnu: macs-3: Update to 3.0.3.
new 23ecc91525 gnu: python-brian2: Update to 2.10.1.
new 109806af87 gnu: python-presto: Improve package, fix tests.
new d7c3df7063 gnu: Add python-apricot-select.
new 41b51bbfa0 gnu: python-pomegranate: Update to 1.1.0.
new 6a8e1a8edd gnu: python-pomegranate: Move to machine-learning.
new 0317880916 gnu: python-pyfaidx: Update to 0.9.0.3.
new 8d97785104 gnu: cnvkit: Update to 0.9.12-0.52f367b.
new c4de0e9ec8 gnu: piglit: Use python-numpy@1.
new 25273e7ae9 gnu: python-tdda: Skip one more test.
new 34a3aae7ac gnu: python-deepdish: Use python-numpy@1.
new 79a3d7b82b gnu: python-deeptools: Update to 3.5.6.
new 298e95e213 gnu: python-funsor: Update to 0.4.6.
new c9d93fc64c gnu: python-mygene: Switch to pyproject.
new 7601c021e1 gnu: python-drep: Update to 3.6.2-0.7b4b8fb.
new 0f36973c0b gnu: Add python-stregion.
new 08cc87f009 gnu: python-drizzlepac: Update to 3.10.0-0.e01563c.
new c64732c41c gnu: python-gizmo-analysis: Remove relax-requirements phase.
new d9edf14bad gnu: python-sep: Remove relax-requirements phase.
new f210d7c9b7 gnu: python-sncosmo: Adjust phases.
new 4dd8ce1820 gnu: python-specreduce: Remove relax-requirements phase.
new 4e515c3153 gnu: python-utilities-awetzel: Remove relax-requirements
phase.
new 9b3399eb3e gnu: python-episcanpy: Use python-numpy@1.
new 4849ce787b gnu: python-fenics-ufl-2019: Use python-numpy@1.
new b6d3c22427 gnu: python-fenics-ffc: Use python-numpy@1.
new c68a5df0ec gnu: Add python-xarray-dataclass.
new 702b7c2375 gnu: python-multiscale-spatial-image: Update to 2.0.3.
new a3eac1aec5 gnu: Remove python-xarray-datatree.
new 8d471f7cbd gnu: python-glue-qt: Relax requirements for ipython version.
new c4bf144904 gnu: python-papermill: Reduce closure size; skip 2 tests.
new cbf6a03d0c gnu: python-vector: Update to 1.7.0.
new b45c05bdf3 gnu: python-scikit-learn-1.6: Skip 3 more tests.
new 64a5811c76 gnu: boost-numpy: Use python-numpy@1.
new 2ec66c114e gnu: rdkit: Use python-numpy@1.
new ad22941efd gnu: python-paramz: Use python-numpy@1.
new c7053b71ee gnu: python-gpy: Use python-numpy@1.
new dab6781502 gnu: python-paramz Move to machinve-learning.
new 6cf283c606 gnu: python-pysynphot: Update to 2.0.0-1.a5e76c3.
new c19a1dce66 gnu: python-spisea: Use python-numpy@1.
new 885a3f5466 gnu: python-scikit-surprise: Use python-numpy@1.
new 1b3c7cbf66 gnu: Add python-statannotations.
new ba0c65ac2c gnu: Remove python-statannot.
new 73f2bb969b gnu: dolphin-emu: Use python-numpy@1.
new 7e5a52b9ab gnu: coda: Use python-numpy@1.
new e5b114e2bc gnu: python-dcor: Use python-numpy@1.
new 398b6c748a gnu: python-hdf5storage: Use pythno-numpy@1.
new bc7f589559 gnu: python-hic2cool: Fix tests.
new cbe86644cc gnu: scvelo: Update to 0.3.3.
new 3eda5f2a3a gnu: python-sbpy: Skip one doc test.
new 48cce12d47 gnu: pigx-scrnaseq: Use python-numpy@1.
new 545e20aff1 gnu: python-hicmatrix: Update to 17.2.
new bfd7047f1b gnu: python-pygenometracks: Update to 3.9.
new c6f0bc5d43 gnu: python-pyamg: Update to 5.3.0.
new 10ab9a9f09 gnu: python-muon: Use python-numpy@1.
new 4bc9012749 gnu: python-salib: Update to 1.5.2.
new a2536b574a gnu: python-pyfma: Use python-numpy@1.
new 1a210ffdc1 gnu: python-accupy: Use python-numpy@1.
new 88178d9729 gnu: python-quadpy: Use python-numpy@1.
new b8a6f666b0 gnu: python-imagecodecs: Fix build.
new 547be09c3f gnu: python-libneuroml: Update to 0.6.7.
This update added new revisions after undoing existing revisions.
That is to say, some revisions that were in the old version of the
branch are not in the new version. This situation occurs
when a user --force pushes a change and generates a repository
containing something like this:
* -- * -- B -- O -- O -- O (01e613271f)
\
N -- N -- N refs/heads/python-team (547be09c3f)
You should already have received notification emails for all of the O
revisions, and so the following emails describe only the N revisions
from the common base, B.
Any revisions marked "omit" are not gone; other references still
refer to them. Any revisions marked "discard" are gone forever.
The 243 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "add" were already present in the repository and have only
been added to this reference.
Summary of changes:
gnu/packages/astronomy.scm | 11 ++++-
gnu/packages/bioinformatics.scm | 92 +++++++++++++++++++--------------------
gnu/packages/bootloaders.scm | 10 ++++-
gnu/packages/maths.scm | 8 ++--
gnu/packages/python-science.scm | 95 ++++++++++++++++++++++++-----------------
gnu/packages/python-xyz.scm | 7 +--
6 files changed, 126 insertions(+), 97 deletions(-)
