guix_mirror_bot pushed a change to branch r-team
in repository guix.
discard dde57b9abf gnu: r-singlet: Update to 0.99.8-1.ef4a374.
discard 7afec8a652 gnu: r-rcppml/devel: Update to 0.5.6-3.2beac65.
discard 8778eea88e gnu: r-cvxr: Disable one test.
discard 1a9928d022 gnu: r-phyloseq: Update to 1.54.1.
discard 1b23a2fc04 gnu: r-gsva: Update to 2.4.6.
discard a7dcf48ef7 gnu: r-mlr3pipelines: Update to 0.11.0.
discard 46caa01889 gnu: r-mlrmbo: Update to 1.1.6.
discard b1cc913d5e gnu: r-lhs: Update to 1.2.1.
discard fcb17a6a2d gnu: r-osqp: Update to 1.0.0.
discard e00ae30701 gnu: r-clarabel: Update to 0.11.2.
discard 54a8c7d78e gnu: r-blackbox: Update to 1.1.54.
discard d542148747 gnu: r-geosphere: Update to 1.6-5.
discard 5830e2e509 gnu: r-mlr3cluster: Update to 0.3.0.
discard c6c06ece9b gnu: Add r-smotefamily.
discard a0067d1230 gnu: Add r-vtreat.
discard 04854dfd88 gnu: Add r-wrapr.
discard f334628c12 gnu: Add r-doe-base.
discard 7cee2971d0 gnu: Add r-conf-design.
discard 260eb2e8e5 gnu: Add r-numbers.
discard 5a8b48795a gnu: Add r-scpdata.
discard 7540ccd920 gnu: Add r-scp.
discard 39e5ea0293 gnu: Add r-msdatahub.
discard 2d834d0400 gnu: r-mlr3cluster: Disable one test.
discard 18a779fcbb gnu: r-aster: Disable vignettes.
discard ce91d082e9 gnu: r-antiword: Update to 1.3.5.
discard 25442cfe76 gnu: r-bbotk: Update to 1.9.0.
discard 6b7ab611b5 gnu: r-mlr3: Update to 1.5.0.
discard 0046712cf1 gnu: r-mlr3misc: Update to 0.21.0.
discard 7398149f82 gnu: r-mlr3mbo: Update to 1.0.0.
discard a247560820 gnu: r-tidypredict: Update to 1.1.0.
discard 8f76fcd0d2 gnu: r-emojifont: Update to 0.6.0.
discard a3a53f94e8 gnu: r-tweedie: Update to 3.0.17.
discard 255f926654 gnu: r-magick: Update to 2.9.1.
discard e745bcbf92 gnu: r-xts: Update to 0.14.2.
discard d82c8b7770 gnu: r-rmumps: Update to 5.2.1-37.
discard 6627985646 gnu: r-rcppnumerical: Update to 0.7-0.
discard fe92f793aa gnu: r-openssl: Update to 2.3.5.
discard fca5cd9144 gnu: r-countrycode: Update to 1.7.0.
discard b3d11e2611 gnu: r-scran: Update to 1.38.1.
discard 4dd89f00dd gnu: r-scdblfinder: Update to 1.24.10.
discard 9b4413c572 gnu: r-mutationalpatterns: Update to 3.20.1.
discard e828e5becd gnu: r-gsva: Update to 2.4.5.
discard 68ef0ffdae gnu: r-systempiperdata: Update to 2.14.5.
discard a1e3ad086a gnu: r-illuminahumanmethylationepicv2manifest: Update to
1.0.1.
discard 881344fb70 gnu: r-illuminahumanmethylationepicv2anno-20a1-hg38: Update
to 1.0.1.
discard f2dcc494e8 gnu: r-survcomp: Update to 1.60.1.
discard 4ec311b27d gnu: apache-arrow: Update to 23.0.1.
discard 27ade6ee7f gnu: r-eyelinker: Update to 0.2.2.
discard e06d02f42b gnu: r-mlr3viz: Update to 0.11.0.
discard f39b8bdf7c gnu: r-seqminer: Update to 9.9.
discard 974b718459 gnu: r-survminer: Update to 0.5.2.
discard 9cdca4ea1f gnu: r-consrank: Update to 3.0.
discard 1f0b5712c7 gnu: r-univoutl: Update to 0.5.0.
discard 8ed2156ac6 gnu: r-actcd: Update to 1.4-0.
discard 045a81049b gnu: r-graphlayouts: Update to 1.2.3.
discard f3a1959d1d gnu: r-xtable: Update to 1.8-8.
discard 49041cf017 gnu: r-arrow: Update to 23.0.1.1.
discard 5d9ceab381 gnu: r-sf: Update to 1.1-0.
discard 529449bb90 gnu: r-testit: Update to 0.16.
discard f165d4173f gnu: r-tweedie: Update to 3.0.16.
discard a5f65a8cac gnu: r-survey: Update to 4.5.
discard 75030ace1d gnu: r-ggpubr: Update to 0.6.3.
discard 21bda86649 gnu: r-later: Update to 1.4.7.
discard 60c444e4d5 gnu: r-simdesign: Update to 2.24.
discard 8cca7c8b2f gnu: r-raceid: Update to 0.4.0.
discard 8eea2bd847 gnu: r-scatterplot3d: Update to 0.3-45.
discard 4713ec524a gnu: r-ips: Update to 0.0.13.
discard 9dcf08851a gnu: r-useful: Update to 1.2.7.
discard 6171927609 gnu: r-pls: Update to 2.9-0.
discard 035cd7fae9 gnu: r-caliberrfimpute: Update to 1.0-8.
discard 8d34372a73 gnu: r-snowflakeauth: Update to 0.2.2.
discard 1963797ba1 gnu: r-sn: Update to 2.1.3.
discard 1b7b1aa904 gnu: r-ggalluvial: Update to 0.12.6.
discard 822667ba28 gnu: r-ggiraph: Update to 0.9.6.
discard 593082a1b3 gnu: r-ggrepel: Update to 0.9.7.
discard 7a9caee64a gnu: r-vcfr: Update to 1.16.0.
discard 3dfd4fb852 gnu: r-dbi: Update to 1.3.0.
discard 90367b6155 gnu: r-smoof: Update to 1.7.0.
discard 16a8644825 gnu: r-argparser: Update to 0.7.3.
discard 5cca4a9c80 gnu: python-pytorch-for-r-torch: Use python-build-system.
discard e8e132df1b gnu: r-iotools: Update to 0.4-0.
discard efb3dff446 gnu: r-fauxpas: Update to 0.6.0.
discard 337b0f009f gnu: r-paws-common: Update to 0.8.9.
discard 6eb8699147 gnu: r-mlr3: Update to 1.4.0.
discard fff465fcc1 gnu: r-mlr3misc: Update to 0.20.0.
discard 0b8833eef7 gnu: r-lobstr: Update to 1.2.0.
discard 735262d8b0 gnu: r-rselenium: Update to 1.7.10.
discard 0dc43c50c6 gnu: r-ada: Update to 2.0-5.1.
discard acbe1976a9 gnu: r-clue: Update to 0.3-67.
discard c131e341f0 gnu: r-gridtext: Update to 0.1.6.
discard 4a934baddc gnu: r-mlbench: Update to 2.1-7.
discard f5eb74ce7e gnu: r-rms: Update to 8.1-1.
discard 23b8483162 gnu: r-future-apply: Update to 1.20.2.
discard 5119170b9e gnu: r-huge: Update to 1.4.
discard 8dffa5c50d gnu: r-tm: Update to 0.7-18.
discard 3d857d39d1 gnu: r-fmesher: Update to 0.7.0.
discard 90a91df4ea gnu: r-ncmisc: Update to 1.3.1.
discard c3a46ac6f9 gnu: r-dofuture: Update to 1.2.1.
discard c36b0f808a gnu: r-tseries: Update to 0.10-60.
discard 368a679e4b gnu: r-laplacesdemon: Update to 16.1.8.
discard bc973549a2 gnu: r-relations: Update to 0.6-16.
discard f423434447 gnu: r-gap: Update to 1.14.
discard 81d04da408 gnu: r-readr: Update to 2.2.0.
discard 0b9db77f76 gnu: r-fuzzyjoin: Update to 0.1.8.
discard 365eb91850 gnu: r-effects: Update to 4.2-5.
discard a8e6bd1a0c gnu: r-ggiraph: Update to 0.9.5.
discard 037364a512 gnu: r-flare: Update to 1.8.
discard b2c9bc08b7 gnu: r-bb: Update to 2026.1.0.
discard 9bc03aeaf7 gnu: r-ecosolver: Update to 0.6.1.
discard 4199f9b5f5 gnu: r-voltron: Replace custom phase with #:skipped-tests.
discard c9e0e47fb9 gnu: r-caretensemble: Replace custom phase with
#:skipped-tests.
discard 0756023b96 gnu: r-lightgbm: Replace custom phase with #:skipped-tests.
discard f44ca77753 gnu: r-rvenn: Replace custom phase with #:skipped-tests.
discard d6ab85e812 gnu: r-mosaic: Replace custom phase with #:skipped-tests.
discard 05af8e8473 gnu: r-rsconnect: Replace custom phase with #:skipped-tests.
discard 2e708fdbd0 gnu: r-phangorn: Replace custom phase with #:skipped-tests.
discard 68482a01e0 gnu: r-latex2exp: Replace custom phase with #:skipped-tests.
discard 4665b0a9d1 gnu: r-glmmtmb: Replace custom phase with #:skipped-tests.
discard e26bd62cad gnu: r-options: Replace custom phase with #:skipped-tests.
discard a4fc399ea8 gnu: r-seqminer: Replace custom phase with #:skipped-tests.
discard b8b6323ddd gnu: r-seqminer: Add missing inputs.
discard 8b11c24fe1 gnu: r-arrow: Replace custom phase with #:skipped-tests.
discard ebfe1cbfbf gnu: r-proxyc: Replace custom phase with #:skipped-tests.
discard 3a975fe15f gnu: r-bedr: Replace custom phase with #:skipped-tests.
discard 01009ab209 gnu: r-data-tree: Replace custom phase with #:skipped-tests.
discard 1456e48c60 gnu: r-bindr: Replace custom phase with #:skipped-tests.
discard 69e80dc3e8 gnu: r-flextable: Replace custom phase with #:skipped-tests.
discard 998b73c406 gnu: r-lintr: Replace custom phase with #:skipped-tests.
discard 1587d2a811 gnu: r-workflows: Replace custom phase with #:skipped-tests.
discard 83ccef90a7 gnu: r-mi: Enable all tests.
discard f9bad9886b gnu: r-rstpm2: Enable all tests.
discard cd4d78a63c gnu: r-trycatchlog: Replace custom phase with
#:skipped-tests.
discard 59fe9a3086 gnu: r-bslib: Replace custom phase with #:skipped-tests.
discard f76513d094 gnu: r-datawizard: Replace custom phase with
#:skipped-tests.
discard 953b1aed6f gnu: r-ggdist: Replace custom phase with #:skipped-tests.
discard c639a0ca3f gnu: r-tailor: Replace custom phase with #:skipped-tests.
discard bff4b9d78c gnu: r-vcr: Replace custom phase with #:skipped-tests.
discard 453c229edb gnu: r-readr: Replace custom phase with #:skipped-tests.
discard ab4b3a84a9 gnu: r-gfonts: Replace custom phase with #:skipped-tests.
discard f7eae75551 gnu: r-cutpointr: Replace custom phase with #:skipped-tests.
discard 38c448743f gnu: r-httr2: Replace custom phase with #:skipped-tests.
discard 1c0201a1b9 build-system/r: Add build phase to skip tests.
discard 2c9b2b7bee gnu: r-biomart: Update to 2.66.1.
discard ad33762467 gnu: r-animalcules: Update to 1.26.1.
discard f89033cc05 import/cran: Uniquify inputs.
discard ca1eeae8aa import/cran: Use sets instead of lset-union.
discard 46797406b8 gnu: r-cytoml: Update list of ignored native inputs.
discard c6c4e99f2c import/cran: Fix import of packages in single quotes.
discard 1ee716fef1 gnu: r-tsne: Move to (gnu packages cran).
discard 2fbd8fbd2a gnu: r-trimcluster: Move to (gnu packages cran).
discard f708058d4d gnu: r-tmvnsim: Move to (gnu packages cran).
discard 82b1ce3533 gnu: r-tidyselect: Move to (gnu packages cran).
discard 52fb696f40 gnu: r-tidyr: Move to (gnu packages cran).
discard 0fc5e5dc52 gnu: r-tibble: Move to (gnu packages cran).
discard 4db0b98c68 gnu: r-testthat: Move to (gnu packages cran).
discard 989a8f060f gnu: r-tclust: Move to (gnu packages cran).
discard 2daf9b6c4b gnu: r-synchronicity: Move to (gnu packages cran).
discard de99c83913 gnu: r-statmod: Move to (gnu packages cran).
discard 415c5daada gnu: r-sparsem: Move to (gnu packages cran).
discard 2948a47cee gnu: r-sourcetools: Move to (gnu packages cran).
discard 1f1228a7d4 gnu: r-snow: Move to (gnu packages cran).
discard ab74ebdc84 gnu: r-sn: Move to (gnu packages cran).
discard b99d94c623 gnu: r-simr: Move to (gnu packages cran).
discard f0b2a1c732 gnu: r-sfsmisc: Move to (gnu packages cran).
discard 047cb9d7e3 gnu: r-segmented: Move to (gnu packages cran).
discard 80d5ec328c gnu: r-vpc: Move to (gnu packages cran).
discard efd359e743 gnu: r-rversions: Move to (gnu packages cran).
discard 6a0f2b511a gnu: r-runit: Move to (gnu packages cran).
discard 606dc0ea79 gnu: r-rtsne: Move to (gnu packages cran).
discard b27fcd0a77 gnu: r-rstudioapi: Move to (gnu packages cran).
discard d9f8129794 gnu: r-rsqlite: Move to (gnu packages cran).
discard f2bd16f4e5 gnu: r-rrcov: Move to (gnu packages cran).
discard 386cad3dce gnu: r-rprojroot: Move to (gnu packages cran).
discard 378edec783 gnu: r-roxygen2: Move to (gnu packages cran).
discard 58edf06cd7 gnu: r-rocr: Move to (gnu packages cran).
discard 8dbb431e9f gnu: r-robustbase: Move to (gnu packages cran).
discard 317e852693 gnu: r-robust: Move to (gnu packages cran).
discard dd819a7087 gnu: r-rngtools: Move to (gnu packages cran).
discard 2e5efe079e gnu: r-rmarkdown: Move to (gnu packages cran).
discard 3fe2287e20 gnu: r-rlrsim: Move to (gnu packages cran).
discard 79a6f2c93a gnu: r-rlang: Move to (gnu packages cran).
discard f37668f83c gnu: r-rematch: Move to (gnu packages cran).
discard d79c413754 gnu: r-registry: Move to (gnu packages cran).
discard d6663427e7 gnu: r-reghelper: Move to (gnu packages cran).
discard 4c20b27009 gnu: r-readr: Move to (gnu packages cran).
discard 54daeead63 gnu: r-rcurl: Move to (gnu packages cran).
discard 2d562aacf7 gnu: r-rcppprogress: Move to (gnu packages cran).
discard 5a4a1377c6 gnu: r-rcppeigen: Move to (gnu packages cran).
discard 8e82a1eb78 gnu: r-rcpparmadillo: Move to (gnu packages cran).
discard b13fe37162 gnu: r-r-utils: Move to (gnu packages cran).
discard 34776bee0f gnu: r-r-rsp: Move to (gnu packages cran).
discard 4e3aca16bf gnu: r-r-methodss3: Move to (gnu packages cran).
discard b58a9c9837 gnu: r-r-oo: Move to (gnu packages cran).
discard 56511440d8 gnu: r-r-cache: Move to (gnu packages cran).
discard 901e355d67 gnu: r-rann: Move to (gnu packages cran).
discard 620ea66d19 gnu: r-ranger: Move to (gnu packages cran).
discard e8fd441bb9 gnu: r-randomforest: Move to (gnu packages cran).
discard 9db7b062c7 gnu: r-rcolorbrewer: Move to (gnu packages cran).
discard bbe85f7f2c gnu: r-ez: Update to 4.5-0.
discard 7439eac289 gnu: r-unigd: Update to 0.2.0.
discard 39f3ed02a8 gnu: r-tweedie: Update to 3.0.14.
discard 7d09a40aea gnu: r-multcompview: Update to 0.1-11.
discard 4f72f3cba3 gnu: r-stable: Update to 1.1.7.
discard ad0cf838b4 gnu: r-rpostgres: Update to 1.4.10.
discard 2df609a804 gnu: r-msnid: Update to 1.44.2.
discard fafefa4437 gnu: r-nebulosa: Update to 1.20.1.
discard 06e4090b2e gnu: r-forecast: Update to 9.0.1.
discard e51503c7bf gnu: r-gstat: Update to 2.1-5.
discard e0e6a8cc40 gnu: r-randomforestsrc: Update to 3.5.1.
discard e1f4307091 gnu: r-stars: Update to 0.7-1.
discard 23251725df gnu: r-vdiffr: Update to 1.0.9.
discard 525c8a2e88 gnu: r-igraph: Update to 2.2.2.
discard bcd7f7c67e gnu: r-nanoarrow: Update to 0.8.0.
discard 87877dfc5c gnu: r-semplot: Update to 1.1.8.
discard e967dc430b gnu: r-semtools: Update to 0.5-8.
discard 63bf267e05 gnu: r-fillpattern: Update to 1.0.3.
discard d8bb0705d8 gnu: r-xgboost: Update to 3.2.0.1.
discard 02f7a73308 gnu: r-xml: Update to 3.99-0.22.
discard 6b6da1243a gnu: r-ggvis: Update to 0.4.10.
discard 8382273f3c gnu: r-haplo-stats: Update to 1.9.8.2.
discard 32ab2ae09d gnu: r-spdep: Update to 1.4-2.
discard 0c53b12216 gnu: r-targets: Update to 1.12.0.
discard fe9ae9a339 gnu: r-tarchetypes: Update to 0.14.0.
discard 89390939f6 gnu: r-flextable: Update to 0.9.11.
discard 4b16b6118f gnu: r-reticulate: Update to 1.45.0.
discard ff17f0a8c4 gnu: r-later: Update to 1.4.6.
discard acedbcac17 gnu: r-simdesign: Update to 2.23.
discard 3144c3195d gnu: r-np: Update to 0.60-20.
discard a485692315 gnu: r-trust: Update to 0.1-9.
discard 625da277bb gnu: r-psychotools: Update to 0.7-6.
discard 4729a08265 gnu: r-lpsolveapi: Update to 5.5.2.0-17.15.
discard bb80123fcf gnu: r-sp: Update to 2.2-1.
discard bb2f089f00 gnu: r-rcppspdlog: Update to 0.0.27.
discard f51f8f7897 gnu: r-httr: Update to 1.4.8.
discard 8125449246 gnu: r-mirai: Update to 2.6.0.
discard adb7dbeb55 gnu: r-marginaleffects: Update to 0.32.0.
discard 01775bb921 gnu: r-plotrix: Update to 3.8-14.
discard 59503f1923 gnu: r-dbplyr: Update to 2.5.2.
discard 2e9ea38e5e gnu: r-model4you: Update to 0.9-9.
discard 8675624aa7 gnu: r-ggpicrust2: Update to 2.5.10.
discard b6dd75fbdd gnu: r-dunn-test: Update to 1.3.7.
add 78276ee606 gnu: Add python-lln-libparse.
add 7425e7e03a gnu: Add python-yamlcore-0.0.2.
add d1f4adcd1c gnu: python-cloup: Update to 3.0.8.
add 1ae39621d2 gnu: Add librelane.
add cbda83ad5a gnu: mg: Update to 20260227.
add 762f08d74a gnu: Remove autokey.
add ebe4cc6b3b gnu: Remove python-dolfin-adjoint.
add 512ed73989 teams: Update gnome-core-refresh script.
add d18d6e07e5 gnu: hicolor-icon-theme: Update to 0.18.
add d7cc8cbef4 gnu: gnutls: Update to 3.8.9.
add 112303be80 gnu: brotli: Update to 1.1.0.
add 5ea7ac82a4 gnu: python-brotlicffi: Update to 1.1.0.0.
add c27389ed51 gnu: p11-kit: Update to 0.25.5, extend trust paths.
add 2314a89ccc gnu: p11-kit: Add nss-certs to default trust path.
add 7ea46ac72f gnu: p11-kit: Add search path specification for
P11_MODULE_PATH.
add 662790943d gnu: softhsm: Install p11-kit module.
add a6d7b44cce gnu: gnutls: Streamline definition.
add 356234dc5f gnu: gnutls: Enable zstd compression.
add 38e7132dcf gnu: gnutls: Use p11-kit to provide the default
certificates.
add c5cff587eb gnu: fontconfig: Update to 2.16.0 and modernize.
add bda6070b47 gnu: openssl: Reinstate parallel tests.
add 9da01b8882 gnu: openssl: Do not version data directory.
add bf26de07bd build-system: glib-or-gtk: Also wrap binaries in sbin
directories.
add 9265c30c43 gnu: glib: Update to 2.86.0.
add 2e5e126f41 gnu: gobject-introspection: Update to 1.86.0.
add 87135e7d91 gnu: gobject-introspection: Delete unnecessary patches.
add 0c15434630 gnu: gobject-introspection: Wrap necessary binaries.
add e91af9d876 gnu: yelp-xsl: Update to 42.4.
add a40439873e gnu: dbus: Update to 1.16.2.
add 38f501c928 gnu: gnome-backgrounds: Update to 48.2.1.
add f6a7f12680 gnu: gsettings-desktop-schemas: Update to 48.0.
add 2237af02fc gnu: glib-networking: Update to 2.80.1.
add 396d955f06 gnu: harfbuzz: Update home page.
add 69ed70167e gnu: Remove pango-1.90.
add 1bca474d01 gnu: pango: Update to 1.56.4.
add c73829a82a gnu: mm-common: Update to 1.0.7.
add 806a1de82c gnu: glibmm: Update to 2.86.0.
add 0527bc649a gnu: pangomm: Update to 2.56.1.
add 336f3491bb gnu: [email protected]: Fix GIR parser.
add d0fe72f6a8 gnu: [email protected]: Update to 0.52.11.
add d70fe7420b gnu: vala: Update to 0.56.18.
add 19d2038003 gnu: libsoup-minimal: Update to 3.6.5.
add 40a10d1f4a gnu: libsoup: Apply patches fixing deadlocks and
CVE-2025-4476.
add 22efd612d7 gnu: aspell: Update to 0.60.8.1.
add c11325ef59 gnu: orc: Update to 0.4.41.
add 2ce1fbc553 gnu: ftgl: Fix build.
add cb6be79550 gnu: librest: Update to 0.10.2.
add b743511181 gnu: Remove gnome-online-accounts-3.44.
add d7b377c28a gnu: python-pygobject: Update to 3.54.3, disable tests.
add faf37926ef gnu: Add python-pygobject-3.50.
add 1739ab1eb3 gnu: libgsf: Update to 1.14.54.
add 7c20a7517d gnu: Add tinysparql.
add 8464195ef1 gnu: Add localsearch.
add 472e264ad6 gnu: gdk-pixbuf: Update to 2.44.4.
add 76f1682057 gnu: gspell: Update to 1.14.2.
add 5708c1d67f gnu: libnotify: Update to 0.8.8.
add 1f9e47518b gnu: python-dbus: Rename to python-dbus-1.2.
add c8392e4a5a gnu: python-dbus-python: Rename to python-dbus.
add b1b10621de gnu: Add python-dbus-python as deprecated alias.
add c5f77cb261 gnu: ibus-minimal: Use git source.
add 3a2a4c3d13 gnu: ibus-minimal: Update to 1.5.32.
add 258340b5b3 gnu: upower: Fix test suite.
add 8c9c0f4735 gnu: upower: Update to 1.90.10.
add f74a37a4ad gnu: polkit: Remove unneeded phase.
add 8bc35d4270 gnu: gst-plugins-bad: Modernize inputs.
add df44180879 gnu: Remove zxing-cpp-1.2.
add 4aa0c52e80 gnu: gtk: Update to 4.20.3.
add bbbd083aaa gnu: gtk: Use tinysparql.
add a12539b330 gnu: gtk: Check after install.
add 0a5c7c5e5d gnu: gtkmm: Update to 4.20.0.
add b2a8efe507 gnu: gtkmm: Update home page.
add da1a2d422b gnu: gtksourceview: Update to 5.16.0.
add 3004f90d6e gnu: libadwaita: Update to 1.8.2.
add 2fcc48d913 gnu: umockdev: Update to 0.19.1.
add 2e7d3ada3d gnu: Improve xdg-desktop-portal.
add a2d0f215f2 gnu: xdg-desktop-portal: Use XDG_DATA_DIRS as search path.
add 7b4b9e5317 gnu: xdg-desktop-portal-gtk: Improve package definition.
add 7f76cb2e20 gnu: Add libxdgp-origin.
add ed61551791 gnu: xdg-desktop-portal-gnome: Update to 48.0.
add 5676ef324e gnu: adwaita-icon-theme: Update to 48.1.
add 296f0f872c gnu: libsecret: Update to 0.21.7.
add 29081cc644 gnu: libsecret: Remove obsolete patch.
add cc7f0047b1 gnu: gjs: Update to 1.84.2.
add 3d4cbc5890 gnu: gjs: Fix build with glib 2.86.
add 36d929a13a gnu: gssdp: Update to 1.6.4.
add 3c7ae61db2 gnu: gupnp: Update to 1.6.9.
add 4124350ec8 gnu: jsonrpc-glib: Update to 3.44.2.
add ee2a593b8b gnu: libdex: Update to 1.0.0.
add 46af2104ed gnu: libgee: Update to 0.20.8.
add 4889ac4cb2 gnu: libmanette: Update to 0.2.12.
add b9aeeab16f gnu: libmediaart: Update to 1.9.7.
add e27dc6e1b5 gnu: libpanel: Update to 1.10.3.
add 207089f2e0 gnu: tecla: Update to 48.0.2.
add 397017a4d1 gnu: template-glib: Update to 3.36.3.
add 1781159799 gnu: vte: Update to 0.82.3.
add 840d690b45 gnu: webkitgtk: Enable WebRTC.
add e7789cb70e gnu: rygel: Update to 0.44.2.
add 43bb25763f gnu: sysprof: Update to 48.1.
add 9b3f1e9244 gnu: gnome-desktop: Update to 44.4.
add 2858d10632 gnu: gnome-session: Update to 48.0.
add 3497556be3 gnu: baobab: Update to 48.0.
add 9ab383fd1d gnu: d-spy: Update to 48.0.
add 770d3d0b45 gnu: gtk-vnc: Update to 1.5.0.
add 40d1d7bfce gnu: libshumate: Update to 1.5.1.
add 632377f748 gnu: gexiv2: Update to 0.14.6.
add 6ef7e7bcf4 gnu: network-manager: Update to 1.54.3.
add 6f7928eb52 gnu: gnome-bluetooth: Update to 47.1.
add b32d3d79a6 gnu: gnome-calculator: Update to 48.1.
add 2a39ff493f gnu: gnome-characters: Update to 48.0.
add 840d9ceb19 gnu: gnome-color-manager: Update to 3.36.2.
add af6948f51a gnu: gnome-clocks: Update to 48.0.
add f7b6dca4cf gnu: gnome-console: Update to 48.1.
add 511d5543c5 gnu: gnome-console: Fix test.
add dd4748994c gnu: gnome-font-viewer: Update to 48.0.
add 22db8a52dd gnu: gnome-keyring: Update to 48.0.
add 6950deccde gnu: gnome-settings-daemon: Update to 48.1.
add b785ad5150 gnu: gnome-system-monitor: Update to 48.1.
add e84b5d71df gnu: gnome-user-share: Update to 48.2.
add 10ff30dae5 gnu: gnome-user-docs: Update to 48.5.
add 0a8155e889 gnu: gnome-weather: Update to 48.0.
add 5c8cec58a7 gnu: gnome-text-editor: Update to 48.3.
add 244bdec50b gnu: mutter: Update to 48.7.
add 9e7c9c45a6 gnu: mutter: Support JPEG XL backgrounds.
add c198bcfb8f gnu: gnome-remote-desktop: Update to 48.3.
add 02d1f7c1f2 gnu: orca: Update to 48.9.
add 2d5a63f9fa gnu: gnome-connections: Update to 48.0.
add c10a5d440b gnu: gnome-software: Update to 48.4.
add ff38eab03f gnu: evince: Update to 48.1.
add 110b9cffec gnu: yelp: Update to 42.3.
add 542bc85cdc gnu: gnome-online-accounts: Update to 3.54.9.
add b74c687ea2 gnu: evolution-data-server: Update to 3.56.2.
add 0dbe325da3 gnu: evolution: Update to 3.56.1.
add 44c495a0b1 gnu: calls: Update to 48.2.
add 8837eee8e3 gnu: gnome-calendar: Update to 48.1.
add 80739e6d52 gnu: gnome-contacts: Update to 48.0.
add e0b82dd224 gnu: gvfs: Update to 1.58.0.
add 61143acfcb gnu: epiphany: Update to 48.5.
add 2f18c687eb gnu: msgraph: Update to 0.3.3.
add c2f2a756f5 gnu: nautilus: Update to 48.5.
add 8f9be1769c gnu: accountsservice: Run checks after installation.
add ba58c7e2f1 gnu: gnome-maps: Update to 49.3.
add 8c98ece132 gnu: Remove gnome-online-miners.
add 659b1b0450 gnu: Remove gfbgraph.
add d60cb924bd gnu: gnome-control-center: Update to 48.6.
add 7c02c98e6a gnu: gnome-initial-setup: Update to 48.1.
add 1e5cad6911 gnu: gdm: Update to 48.0.
add 4acc1d73ae gnu: gnome-shell: Update to 48.7.
add cd59a03717 gnu: gom: Update to 0.5.5.
add 08c5d644f1 gnu: grilo: Update to 0.3.19.
add 0eca89180d gnu: grilo-plugins: Update to 0.3.18.
add d7502491f8 gnu: totem: Update to 43.2.
add 2ac7660934 gnu: libpeas-2: Update to 2.0.7.
add a233ef65a6 gnu: gnome-builder: Update to 48.2.
add 5ce50f59de gnu: polari: Use tinysparql.
add b870f04599 gnu: gnome-boxes: Update to 48.1.
add a94ac31445 gnu: gnome-meta-core-utilities: Use localsearch.
add 08a9f8941f gnu: Add glycin-loaders.
add 1883063bcf gnu: Add rust-glycin-3.
add 3355a9c73f gnu: Add loupe.
add d1bb74b27b gnu: gnome-meta-core-utilities: Replace eog with loupe.
add d055ea58d2 gnu: Add gnome-tour.
add 6230d86e81 gnu: gnome-menus: Update to 3.38.1.
add 4b0954ea87 gnu: gnome-shell-extensions: Update to 48.3.
add 6d2d26f46a gnu: gnome-shell-extension-unite-shell: Update to 84.
add bcd88bd4e3 gnu: gnome-shell-extension-appindicator: Update to 61.
add a8ef3d2faa gnu: gnome-shell-extension-clipboard-indicator: Update to
69.
add 802545f50c gnu: gnome-shell-extension-customize-ibus: Update to 92.
add eee9f193c1 gnu: gnome-shell-extension-dash-to-dock: Update to 102.
add 4b3a650cc6 gnu: gnome-shell-extension-gsconnect: Update to 71.
add c4d6ccb0c1 gnu: gnome-shell-extension-just-perfection: Update to 35.0.
add 6aaab6b889 gnu: gnome-shell-extension-dash-to-panel: Update to 72.
add 40c708e644 gnu: gnome-shell-extension-paperwm: Update to 49.0.0.
add 22170b4724 gnu: gnome-shell-extension-night-theme-switcher: Update to
79.
add 440ffe831d gnu: gnome-shell-extension-v-shell: Update to 49.6.1.
add 4c17260341 gnu: Remove gnome-shell-extension-vertical-overview.
add 6962056903 gnu: gnome-shell-extension-burn-my-windows: Update to 47.
add 768e608ac3 gnu: gnome-shell-extension-blur-my-shell: Update to 70.
add 1b81717d50 gnu: gnome-shell-extension-radio: Update to 24-0.860e55b.
add f5b3bb06a6 gnu: gnome-shell-extension-vitals: Update to 72.0.0.
add 981727f6ef gnu: gnome-shell-extension-weather-oclock: Update to 49.0.
add 47f83de0c6 gnu: Remove sequeler.
add c5c02d134c gnu: Add gnome-circle module.
add c359afed0f gnu: apostrophe: Move to (gnu packages gnome-circle).
add 24676c9348 gnu: gnome-authenticator: Move to (gnu packages
gnome-circle).
add 5d08356d55 gnu: authenticator: Remove deprecation.
add 6024126144 gnu: deja-dup: Move to (gnu packages gnome-circle).
add 93d5627b22 gnu: dialect: Move to (gnu packages gnome-circle).
add b99c31ffef gnu: raider: Move to (gnu packages gnome-circle).
add 0dc6b3252a gnu: komikku: Move to (gnu packages gnome-circle).
add c7ad609522 gnu: komikku-servers: Move to (gnu packages gnome-circle).
add 971eb6746e gnu: polari: Move to (gnu packages gnome-circle).
add 2d919e966c gnu: passwordsafe: Remove deprecation.
add 39043b6ce5 gnu: secrets: Move to (gnu packages gnome-circle).
add 9f7ed4fb53 gnu: gnome-mahjongg: Move to (gnu packages gnome-circle).
add 2d985ea2f2 gnu: textpieces: Move to (gnu packages gnome-circle).
add 42384ea5e6 gnu: blanket: Move to (gnu packages gnome-circle).
add 219e6365d5 gnu: komikku: Update to 1.99.0.
add 9a9f6d28d0 gnu: komikku-servers: Update to 1.99.0.
add 48e8fd7492 gnu: Add fragments.
add 71567bf712 gnu: Add cartridges.
add 067d356e9e gnu: gnote: Update to 48.2.
add d3c8ba1bd4 gnu: Add resources.
add a2dc026afb gnu: gtranslator: Update to 49.0.
add 7f638c8ea1 gnu: Remove libgda.
add bb8f1efc36 gnu: java-brotli: Fix build.
add aeaf45cadf gnu: dbus-verbose: Fix build.
add 4648b16754 gnu: deluge: Fix build.
add ffe988b520 gnu: gnome-plots: Fix build.
add b61ea5173d gnu: gnome-recipes: Fix build.
add 5ec5a043f7 gnu: gp-saml-gui: Fix build.
add b38753c27d gnu: tuba: Update to 0.10.3.
add 7a8b90fcd6 gnu: soundconverter: Fix build.
add 19f64d1b49 gnu: ibus-table: Fix build.
add 6414018f27 gnu: jack-select: Fix build.
add e7c59a901c gnu: libmodulemd: Fix build.
add 20aa99df50 gnu: python-gst: Fix build.
add 6fa2f36237 gnu: rednotebook: Fix build.
add 0d0a047a7e gnu: solaar: Fix build.
add 191cd90ab5 gnu: ulauncher: Fix build.
add ab0fef2415 gnu: volctl: Fix build.
add a6b738cc4b gnu: sbcl-cl-gtk4: Update to 1.0.0-3.b3e69da.
add f8b6103ed4 gnu: lua-lgi: Fix build.
add 8547db254f gnu: lightdm: Fix build.
new 2054185b2b gnu: r-dunn-test: Update to 1.3.7.
new ac5fc59153 gnu: r-ggpicrust2: Update to 2.5.10.
new 0cf2150532 gnu: r-model4you: Update to 0.9-9.
new 141a119186 gnu: r-dbplyr: Update to 2.5.2.
new fc09ed07fe gnu: r-plotrix: Update to 3.8-14.
new 03cb34cc22 gnu: r-marginaleffects: Update to 0.32.0.
new 3404359db4 gnu: r-mirai: Update to 2.6.0.
new b72e7f20eb gnu: r-httr: Update to 1.4.8.
new 2e1f291630 gnu: r-rcppspdlog: Update to 0.0.27.
new 1d4f623c39 gnu: r-sp: Update to 2.2-1.
new 3a70892db4 gnu: r-lpsolveapi: Update to 5.5.2.0-17.15.
new c84a14506a gnu: r-psychotools: Update to 0.7-6.
new 6ddf57518c gnu: r-trust: Update to 0.1-9.
new 9649ee5b1b gnu: r-np: Update to 0.60-20.
new d1d7b3b80d gnu: r-simdesign: Update to 2.23.
new dc58051f68 gnu: r-later: Update to 1.4.6.
new f3ea28741f gnu: r-reticulate: Update to 1.45.0.
new 85748e24b6 gnu: r-flextable: Update to 0.9.11.
new cfaf270192 gnu: r-tarchetypes: Update to 0.14.0.
new 53e151cecb gnu: r-targets: Update to 1.12.0.
new f82a4e62a9 gnu: r-spdep: Update to 1.4-2.
new 4708f96a69 gnu: r-haplo-stats: Update to 1.9.8.2.
new 7d09274373 gnu: r-ggvis: Update to 0.4.10.
new 82c98aa59b gnu: r-xml: Update to 3.99-0.22.
new 66eaaed729 gnu: r-xgboost: Update to 3.2.0.1.
new 2fbf76e468 gnu: r-fillpattern: Update to 1.0.3.
new 0b2d005d1e gnu: r-semtools: Update to 0.5-8.
new 3343275c0e gnu: r-semplot: Update to 1.1.8.
new 0a7ff356fd gnu: r-nanoarrow: Update to 0.8.0.
new 91c708dbbe gnu: r-igraph: Update to 2.2.2.
new 393bd95b54 gnu: r-vdiffr: Update to 1.0.9.
new d2b9315b23 gnu: r-stars: Update to 0.7-1.
new 259a8a0f1d gnu: r-randomforestsrc: Update to 3.5.1.
new 41d34c182d gnu: r-gstat: Update to 2.1-5.
new 8174ce825b gnu: r-forecast: Update to 9.0.1.
new b7f17414d2 gnu: r-nebulosa: Update to 1.20.1.
new 53a7906884 gnu: r-msnid: Update to 1.44.2.
new 3e1b47eb30 gnu: r-rpostgres: Update to 1.4.10.
new a745be1be5 gnu: r-stable: Update to 1.1.7.
new 9fdce6bcfb gnu: r-multcompview: Update to 0.1-11.
new 988ae4fc86 gnu: r-tweedie: Update to 3.0.14.
new 56119dc3ce gnu: r-unigd: Update to 0.2.0.
new baf0775970 gnu: r-ez: Update to 4.5-0.
new 3076a6c0ab gnu: r-rcolorbrewer: Move to (gnu packages cran).
new 87792f5235 gnu: r-randomforest: Move to (gnu packages cran).
new 0e4a25dff5 gnu: r-ranger: Move to (gnu packages cran).
new 8b825f2764 gnu: r-rann: Move to (gnu packages cran).
new 83ed184bcb gnu: r-r-cache: Move to (gnu packages cran).
new 461da80fff gnu: r-r-oo: Move to (gnu packages cran).
new 22388c20ff gnu: r-r-methodss3: Move to (gnu packages cran).
new 053c0924d6 gnu: r-r-rsp: Move to (gnu packages cran).
new 7c6c25d0a3 gnu: r-r-utils: Move to (gnu packages cran).
new f4ff598771 gnu: r-rcpparmadillo: Move to (gnu packages cran).
new 24bd94ef27 gnu: r-rcppeigen: Move to (gnu packages cran).
new 7bffe60d05 gnu: r-rcppprogress: Move to (gnu packages cran).
new 006607c3b8 gnu: r-rcurl: Move to (gnu packages cran).
new e8f9e03218 gnu: r-readr: Move to (gnu packages cran).
new 08389437b1 gnu: r-reghelper: Move to (gnu packages cran).
new ba752214bc gnu: r-registry: Move to (gnu packages cran).
new 14f0aa4a6f gnu: r-rematch: Move to (gnu packages cran).
new 6eb489a0c6 gnu: r-rlang: Move to (gnu packages cran).
new 24b8edfb99 gnu: r-rlrsim: Move to (gnu packages cran).
new 3cbe9f9655 gnu: r-rmarkdown: Move to (gnu packages cran).
new d972a223aa gnu: r-rngtools: Move to (gnu packages cran).
new 22f870e17b gnu: r-robust: Move to (gnu packages cran).
new 246d3e91d7 gnu: r-robustbase: Move to (gnu packages cran).
new 1ec2fa7617 gnu: r-rocr: Move to (gnu packages cran).
new fb16da0b69 gnu: r-roxygen2: Move to (gnu packages cran).
new d027646c25 gnu: r-rprojroot: Move to (gnu packages cran).
new 3f9bfdf0bb gnu: r-rrcov: Move to (gnu packages cran).
new e87628cf1b gnu: r-rsqlite: Move to (gnu packages cran).
new 09e7ba3902 gnu: r-rstudioapi: Move to (gnu packages cran).
new 2aa3576b66 gnu: r-rtsne: Move to (gnu packages cran).
new d3f4b3d3a2 gnu: r-runit: Move to (gnu packages cran).
new 195bd83c00 gnu: r-rversions: Move to (gnu packages cran).
new 9c1f4f9a2e gnu: r-vpc: Move to (gnu packages cran).
new d546030518 gnu: r-segmented: Move to (gnu packages cran).
new 25c7fdf75d gnu: r-sfsmisc: Move to (gnu packages cran).
new 20eb3f1d64 gnu: r-simr: Move to (gnu packages cran).
new 5f8cb8d879 gnu: r-sn: Move to (gnu packages cran).
new 1da168e788 gnu: r-snow: Move to (gnu packages cran).
new ddd92979d0 gnu: r-sourcetools: Move to (gnu packages cran).
new 686b696616 gnu: r-sparsem: Move to (gnu packages cran).
new 1f600f9880 gnu: r-statmod: Move to (gnu packages cran).
new 5bb72f8750 gnu: r-synchronicity: Move to (gnu packages cran).
new 956a5d6edb gnu: r-tclust: Move to (gnu packages cran).
new ef1d33f967 gnu: r-testthat: Move to (gnu packages cran).
new 6b38c9e248 gnu: r-tibble: Move to (gnu packages cran).
new 5dfbba0325 gnu: r-tidyr: Move to (gnu packages cran).
new c493206bcb gnu: r-tidyselect: Move to (gnu packages cran).
new 2ccf000a32 gnu: r-tmvnsim: Move to (gnu packages cran).
new 786dc09181 gnu: r-trimcluster: Move to (gnu packages cran).
new 2efcd03d0f gnu: r-tsne: Move to (gnu packages cran).
new 29e5838b96 import/cran: Fix import of packages in single quotes.
new 46da3eccb8 gnu: r-cytoml: Update list of ignored native inputs.
new 0af62cb73f import/cran: Use sets instead of lset-union.
new 6edfc7d675 import/cran: Uniquify inputs.
new f8f7f630c7 gnu: r-animalcules: Update to 1.26.1.
new 997922bfaf gnu: r-biomart: Update to 2.66.1.
new 8af9e5984f build-system/r: Add build phase to skip tests.
new a6546589f5 gnu: r-httr2: Replace custom phase with #:skipped-tests.
new 0822542431 gnu: r-cutpointr: Replace custom phase with #:skipped-tests.
new b9fb69bbcb gnu: r-gfonts: Replace custom phase with #:skipped-tests.
new 953173dfda gnu: r-readr: Replace custom phase with #:skipped-tests.
new 838fb1f2dc gnu: r-vcr: Replace custom phase with #:skipped-tests.
new 41e3c6f0a0 gnu: r-tailor: Replace custom phase with #:skipped-tests.
new 36632b5703 gnu: r-ggdist: Replace custom phase with #:skipped-tests.
new 8c4f3f6870 gnu: r-datawizard: Replace custom phase with
#:skipped-tests.
new 5d999cd8b1 gnu: r-bslib: Replace custom phase with #:skipped-tests.
new f36d49a4e9 gnu: r-trycatchlog: Replace custom phase with
#:skipped-tests.
new 715f036b57 gnu: r-rstpm2: Enable all tests.
new c728b66a26 gnu: r-mi: Enable all tests.
new 4fd8b7ef89 gnu: r-workflows: Replace custom phase with #:skipped-tests.
new 139f477ba7 gnu: r-lintr: Replace custom phase with #:skipped-tests.
new ced47b4f7e gnu: r-flextable: Replace custom phase with #:skipped-tests.
new 95cafc16cd gnu: r-bindr: Replace custom phase with #:skipped-tests.
new 96fa1f66e4 gnu: r-data-tree: Replace custom phase with #:skipped-tests.
new 4efd36a247 gnu: r-bedr: Replace custom phase with #:skipped-tests.
new 1d005bbcc8 gnu: r-proxyc: Replace custom phase with #:skipped-tests.
new f355bba52b gnu: r-arrow: Replace custom phase with #:skipped-tests.
new b35a7c4463 gnu: r-seqminer: Add missing inputs.
new fc4d2c9afc gnu: r-seqminer: Replace custom phase with #:skipped-tests.
new 20898c434e gnu: r-options: Replace custom phase with #:skipped-tests.
new f36273532b gnu: r-glmmtmb: Replace custom phase with #:skipped-tests.
new 20e7c7adb6 gnu: r-latex2exp: Replace custom phase with #:skipped-tests.
new 3a168bd95f gnu: r-phangorn: Replace custom phase with #:skipped-tests.
new 79e3b6202d gnu: r-rsconnect: Replace custom phase with #:skipped-tests.
new 06adf85928 gnu: r-mosaic: Replace custom phase with #:skipped-tests.
new 39164379f9 gnu: r-rvenn: Replace custom phase with #:skipped-tests.
new a32e9df173 gnu: r-lightgbm: Replace custom phase with #:skipped-tests.
new 096476a6e5 gnu: r-caretensemble: Replace custom phase with
#:skipped-tests.
new 4f3ccaac51 gnu: r-voltron: Replace custom phase with #:skipped-tests.
new f7a2474874 gnu: r-ecosolver: Update to 0.6.1.
new 2331bc26fd gnu: r-bb: Update to 2026.1.0.
new 6910b86963 gnu: r-flare: Update to 1.8.
new b1ead1a98d gnu: r-ggiraph: Update to 0.9.5.
new e952b5367d gnu: r-effects: Update to 4.2-5.
new 0f406280e1 gnu: r-fuzzyjoin: Update to 0.1.8.
new beaa9f64a3 gnu: r-readr: Update to 2.2.0.
new 3988dc3c02 gnu: r-gap: Update to 1.14.
new cfa386e305 gnu: r-relations: Update to 0.6-16.
new 7b00259aaa gnu: r-laplacesdemon: Update to 16.1.8.
new d63bc4218e gnu: r-tseries: Update to 0.10-60.
new 5d74764590 gnu: r-dofuture: Update to 1.2.1.
new eb68cab445 gnu: r-ncmisc: Update to 1.3.1.
new 15c5a6f91c gnu: r-fmesher: Update to 0.7.0.
new a6b28095de gnu: r-tm: Update to 0.7-18.
new 91bfbf83e7 gnu: r-huge: Update to 1.4.
new 1e7c6d954f gnu: r-future-apply: Update to 1.20.2.
new c1422c4b21 gnu: r-rms: Update to 8.1-1.
new 4a2ec46e04 gnu: r-mlbench: Update to 2.1-7.
new 09385b846b gnu: r-gridtext: Update to 0.1.6.
new 8b029331cc gnu: r-clue: Update to 0.3-67.
new acb6686b8e gnu: r-ada: Update to 2.0-5.1.
new c2268334f5 gnu: r-rselenium: Update to 1.7.10.
new 7e8f95ebeb gnu: r-lobstr: Update to 1.2.0.
new 15964054ce gnu: r-mlr3misc: Update to 0.20.0.
new bc81801589 gnu: r-mlr3: Update to 1.4.0.
new b47487947e gnu: r-paws-common: Update to 0.8.9.
new a3216eafd9 gnu: r-fauxpas: Update to 0.6.0.
new 39e8d5b4fe gnu: r-iotools: Update to 0.4-0.
new fd82592d52 gnu: python-pytorch-for-r-torch: Use python-build-system.
new 4bc16117ff gnu: r-argparser: Update to 0.7.3.
new 8a2a580ccb gnu: r-smoof: Update to 1.7.0.
new 5978b604c2 gnu: r-dbi: Update to 1.3.0.
new 5c34e44eb3 gnu: r-vcfr: Update to 1.16.0.
new 57cafcabe9 gnu: r-ggrepel: Update to 0.9.7.
new 763f5ff264 gnu: r-ggiraph: Update to 0.9.6.
new a3233319cf gnu: r-ggalluvial: Update to 0.12.6.
new 495620942d gnu: r-sn: Update to 2.1.3.
new bbaf2e601c gnu: r-snowflakeauth: Update to 0.2.2.
new 4fa2d6e067 gnu: r-caliberrfimpute: Update to 1.0-8.
new 76f5144511 gnu: r-pls: Update to 2.9-0.
new 85242182f7 gnu: r-useful: Update to 1.2.7.
new 3d1cf51ebb gnu: r-ips: Update to 0.0.13.
new 2e5a6ca4e1 gnu: r-scatterplot3d: Update to 0.3-45.
new bc457154f1 gnu: r-raceid: Update to 0.4.0.
new 12919c3498 gnu: r-simdesign: Update to 2.24.
new 2889ee6f88 gnu: r-later: Update to 1.4.7.
new 07842afad7 gnu: r-ggpubr: Update to 0.6.3.
new 94ef5636cb gnu: r-survey: Update to 4.5.
new 396b77ad62 gnu: r-tweedie: Update to 3.0.16.
new 9bdec8d188 gnu: r-testit: Update to 0.16.
new 9b72d7125a gnu: r-sf: Update to 1.1-0.
new 3bc001095f gnu: r-arrow: Update to 23.0.1.1.
new 0fa07bba33 gnu: r-xtable: Update to 1.8-8.
new 105bb36e05 gnu: r-graphlayouts: Update to 1.2.3.
new e04151ce00 gnu: r-actcd: Update to 1.4-0.
new 77b3c3216e gnu: r-univoutl: Update to 0.5.0.
new 53128c36a6 gnu: r-consrank: Update to 3.0.
new fd930a5ef2 gnu: r-survminer: Update to 0.5.2.
new d1c398636c gnu: r-seqminer: Update to 9.9.
new 01f22a733d gnu: r-mlr3viz: Update to 0.11.0.
new 806b10c07d gnu: r-eyelinker: Update to 0.2.2.
new 32ee13f05f gnu: apache-arrow: Update to 23.0.1.
new c74f1adff3 gnu: r-survcomp: Update to 1.60.1.
new 5e0d743cbe gnu: r-illuminahumanmethylationepicv2anno-20a1-hg38: Update
to 1.0.1.
new 74aa9d5b0e gnu: r-illuminahumanmethylationepicv2manifest: Update to
1.0.1.
new 854317238f gnu: r-systempiperdata: Update to 2.14.5.
new b81b41c043 gnu: r-gsva: Update to 2.4.5.
new bb0c116bfd gnu: r-mutationalpatterns: Update to 3.20.1.
new 40673b8034 gnu: r-scdblfinder: Update to 1.24.10.
new 7d606658b0 gnu: r-scran: Update to 1.38.1.
new 82da7ceba3 gnu: r-countrycode: Update to 1.7.0.
new 28bcac316e gnu: r-openssl: Update to 2.3.5.
new 51ca06dd3b gnu: r-rcppnumerical: Update to 0.7-0.
new aeed583b78 gnu: r-rmumps: Update to 5.2.1-37.
new adcd962e25 gnu: r-xts: Update to 0.14.2.
new 0ea2ed0718 gnu: r-magick: Update to 2.9.1.
new 4638cb100b gnu: r-tweedie: Update to 3.0.17.
new c2a1fd7bfa gnu: r-emojifont: Update to 0.6.0.
new a4f9ff91e1 gnu: r-tidypredict: Update to 1.1.0.
new b9fb10dc1b gnu: r-mlr3mbo: Update to 1.0.0.
new bf8529642a gnu: r-mlr3misc: Update to 0.21.0.
new ef3ebc6702 gnu: r-mlr3: Update to 1.5.0.
new 03c93b27b0 gnu: r-bbotk: Update to 1.9.0.
new c755732cf5 gnu: r-antiword: Update to 1.3.5.
new f8c4435ada gnu: r-aster: Disable vignettes.
new 960e85fcd1 gnu: r-mlr3cluster: Disable one test.
new 9de07328a1 gnu: Add r-msdatahub.
new ee6b17dc86 gnu: Add r-scp.
new e41b24e32e gnu: Add r-scpdata.
new 8caced5fae gnu: Add r-numbers.
new b49eac0616 gnu: Add r-conf-design.
new 5221c9d147 gnu: Add r-doe-base.
new daecaed695 gnu: Add r-wrapr.
new edb97eb696 gnu: Add r-vtreat.
new a0fe032066 gnu: Add r-smotefamily.
new 736f108c3b gnu: r-mlr3cluster: Update to 0.3.0.
new e47405179c gnu: r-geosphere: Update to 1.6-5.
new d7796a8b3c gnu: r-blackbox: Update to 1.1.54.
new e26111bb84 gnu: r-clarabel: Update to 0.11.2.
new 3610da61f0 gnu: r-osqp: Update to 1.0.0.
new 0535149c60 gnu: r-lhs: Update to 1.2.1.
new e69bda4dbd gnu: r-mlrmbo: Update to 1.1.6.
new 2cf4730a41 gnu: r-mlr3pipelines: Update to 0.11.0.
new 8ccee30104 gnu: r-gsva: Update to 2.4.6.
new f14917624a gnu: r-phyloseq: Update to 1.54.1.
new 84b7de31bf gnu: r-cvxr: Disable one test.
new 6a2c5c0391 gnu: r-rcppml/devel: Update to 0.5.6-3.2beac65.
new 8f3cee52e3 gnu: r-singlet: Update to 0.99.8-1.ef4a374.
This update added new revisions after undoing existing revisions.
That is to say, some revisions that were in the old version of the
branch are not in the new version. This situation occurs
when a user --force pushes a change and generates a repository
containing something like this:
* -- * -- B -- O -- O -- O (dde57b9abf)
\
N -- N -- N refs/heads/r-team (8f3cee52e3)
You should already have received notification emails for all of the O
revisions, and so the following emails describe only the N revisions
from the common base, B.
Any revisions marked "omit" are not gone; other references still
refer to them. Any revisions marked "discard" are gone forever.
The 241 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "add" were already present in the repository and have only
been added to this reference.
Summary of changes:
CODEOWNERS | 1 +
etc/teams.scm | 1 +
etc/teams/gnome/gnome-core-refresh | 4 +-
gnu/local.mk | 26 +-
gnu/packages/admin.scm | 5 +-
gnu/packages/aidc.scm | 21 -
gnu/packages/aspell.scm | 10 +-
gnu/packages/audio.scm | 4 +-
gnu/packages/bittorrent.scm | 35 +-
gnu/packages/check.scm | 4 +-
gnu/packages/compression.scm | 38 +-
gnu/packages/connman.scm | 2 +-
gnu/packages/cups.scm | 2 +-
gnu/packages/databases.scm | 51 -
gnu/packages/display-managers.scm | 2 +-
gnu/packages/electronics.scm | 80 +
gnu/packages/enlightenment.scm | 2 +-
gnu/packages/fediverse.scm | 4 +-
gnu/packages/fontutils.scm | 124 +-
gnu/packages/freedesktop.scm | 107 +-
gnu/packages/games.scm | 6 +-
gnu/packages/geo.scm | 7 +-
gnu/packages/gimp.scm | 2 +-
gnu/packages/gl.scm | 3 +-
gnu/packages/glib.scm | 180 +-
gnu/packages/gnome-circle.scm | 1043 +++++++++
gnu/packages/gnome-xyz.scm | 139 +-
gnu/packages/gnome.scm | 2205 ++++++++------------
gnu/packages/gpodder.scm | 2 +-
gnu/packages/gstreamer.scm | 19 +-
gnu/packages/gtk.scm | 127 +-
gnu/packages/ibus.scm | 68 +-
gnu/packages/lisp-xyz.scm | 6 +-
gnu/packages/lua.scm | 2 +
gnu/packages/maths.scm | 2 +-
gnu/packages/matrix.scm | 2 +-
gnu/packages/messaging.scm | 4 +-
gnu/packages/mpd.scm | 2 +-
gnu/packages/music.scm | 11 +-
gnu/packages/password-utils.scm | 4 +-
gnu/packages/patches/aspell-CVE-2019-25051.patch | 99 -
.../cartridges-fix-non-parallel-build.patch | 57 +
.../patches/fontconfig-cache-ignore-mtime.patch | 4 +-
gnu/packages/patches/ftgl-ftcontour-type.patch | 50 +
...pixbuf-honor-GUIX_GDK_PIXBUF_MODULE_FILES.patch | 10 +-
gnu/packages/patches/gdm-default-session.patch | 11 +-
.../gdm-remove-hardcoded-xwayland-path.patch | 10 +-
.../glycin-sandbox-Adapt-bwrap-invocation.patch | 59 +
.../patches/gnome-online-miners-tracker-3.patch | 1505 -------------
.../patches/gnome-recipes-rest-in-soup.patch | 465 +++++
.../gnome-settings-daemon-screensaver-error.patch | 14 -
gnu/packages/patches/gnutls-no-which.patch | 92 +
.../patches/gnutls-skip-trust-store-test.patch | 15 -
...ct-introspection-absolute-shlib-path-1.72.patch | 173 --
...gobject-introspection-absolute-shlib-path.patch | 8 +-
.../patches/gobject-introspection-cc-1.72.patch | 15 -
.../patches/komikku-future-servers-compat.patch | 360 ----
.../patches/komikku-python-3.11-compat.patch | 57 -
.../patches/libsecret-fix-test-paths.patch | 37 -
.../patches/libsoup-auth-digest-fix-crash.patch | 31 +
...ibsoup-deadlock-in-add_listener_in_thread.patch | 42 +
.../patches/libsoup-fix-merge-of-ranges.patch | 192 ++
.../libsoup-memory-leak-in-soup_form_decode.patch | 101 +
.../patches/libsoup-multipart-bounds-check.patch | 106 +
.../libsoup-use-libdl-instead-of-gmodule.patch | 70 +
gnu/packages/patches/lua-lgi-fix-pango.patch | 19 +
gnu/packages/patches/lua-lgi-fix-ref.patch | 44 +
.../patches/nautilus-extension-search-path.patch | 11 +-
gnu/packages/patches/p11-kit-hurd.patch | 46 -
gnu/packages/patches/pango-skip-libthai-test.patch | 23 -
.../patches/vala-0.52-fix-valagirparser.patch | 72 +
...-1.20.3-disable-configuration-search-exit.patch | 27 -
gnu/packages/polkit.scm | 22 +-
gnu/packages/printers.scm | 2 +-
gnu/packages/python-compression.scm | 4 +-
gnu/packages/python-xyz.scm | 45 +-
gnu/packages/rednotebook.scm | 2 +-
gnu/packages/rpm.scm | 5 +-
gnu/packages/rust-crates.scm | 1843 ++++++++++++++++
gnu/packages/rust-sources.scm | 80 +-
gnu/packages/security-token.scm | 12 +-
gnu/packages/simulation.scm | 85 -
gnu/packages/stenography.scm | 2 +-
gnu/packages/sugar.scm | 6 +-
gnu/packages/task-management.scm | 58 +-
gnu/packages/text-editors.scm | 66 +-
gnu/packages/tls.scm | 138 +-
gnu/packages/video.scm | 2 +-
gnu/packages/vpn.scm | 2 +-
gnu/packages/webkit.scm | 4 +
gnu/packages/wm.scm | 2 +-
gnu/packages/xdisorg.scm | 90 +-
gnu/packages/xfce.scm | 2 +-
gnu/packages/xorg.scm | 2 +-
guix/build/glib-or-gtk-build-system.scm | 4 +-
po/packages/POTFILES.in | 1 +
96 files changed, 5930 insertions(+), 4731 deletions(-)
create mode 100644 gnu/packages/gnome-circle.scm
delete mode 100644 gnu/packages/patches/aspell-CVE-2019-25051.patch
create mode 100644 gnu/packages/patches/cartridges-fix-non-parallel-build.patch
create mode 100644 gnu/packages/patches/ftgl-ftcontour-type.patch
create mode 100644
gnu/packages/patches/glycin-sandbox-Adapt-bwrap-invocation.patch
delete mode 100644 gnu/packages/patches/gnome-online-miners-tracker-3.patch
create mode 100644 gnu/packages/patches/gnome-recipes-rest-in-soup.patch
delete mode 100644
gnu/packages/patches/gnome-settings-daemon-screensaver-error.patch
create mode 100644 gnu/packages/patches/gnutls-no-which.patch
delete mode 100644 gnu/packages/patches/gnutls-skip-trust-store-test.patch
delete mode 100644
gnu/packages/patches/gobject-introspection-absolute-shlib-path-1.72.patch
delete mode 100644 gnu/packages/patches/gobject-introspection-cc-1.72.patch
delete mode 100644 gnu/packages/patches/komikku-future-servers-compat.patch
delete mode 100644 gnu/packages/patches/komikku-python-3.11-compat.patch
delete mode 100644 gnu/packages/patches/libsecret-fix-test-paths.patch
create mode 100644 gnu/packages/patches/libsoup-auth-digest-fix-crash.patch
create mode 100644
gnu/packages/patches/libsoup-deadlock-in-add_listener_in_thread.patch
create mode 100644 gnu/packages/patches/libsoup-fix-merge-of-ranges.patch
create mode 100644
gnu/packages/patches/libsoup-memory-leak-in-soup_form_decode.patch
create mode 100644 gnu/packages/patches/libsoup-multipart-bounds-check.patch
create mode 100644
gnu/packages/patches/libsoup-use-libdl-instead-of-gmodule.patch
create mode 100644 gnu/packages/patches/lua-lgi-fix-pango.patch
create mode 100644 gnu/packages/patches/lua-lgi-fix-ref.patch
delete mode 100644 gnu/packages/patches/p11-kit-hurd.patch
delete mode 100644 gnu/packages/patches/pango-skip-libthai-test.patch
create mode 100644 gnu/packages/patches/vala-0.52-fix-valagirparser.patch
delete mode 100644
gnu/packages/patches/xdg-desktop-portal-1.20.3-disable-configuration-search-exit.patch
