guix_mirror_bot pushed a change to branch r-team
in repository guix.
discard 85ad1eac71 gnu: r-systempiperdata: Update to 2.14.6.
discard c8e7f9aeb5 gnu: r-exactranktests: Update to 0.8-36.
discard 2c48181c6d gnu: r-spatstat-utils: Update to 3.2-2.
discard 356dbe1904 gnu: r-rjava: Update to 1.0-15.
discard c4599d5d4c gnu: r-listenv: Update to 0.10.1.
discard 19f4dfb901 gnu: r-effectsize: Update to 1.0.2.
discard 514c8078ac gnu: r-multcomp: Update to 1.4-30.
discard 0400dfc280 gnu: r-adbcdrivermanager: Update to 0.22.0-1.
discard 7fa5164285 gnu: r-rcppde: Update to 0.1.9.
discard 9eba06a108 gnu: r-party: Update to 1.3-19.
discard b976359689 gnu: r-astsa: Update to 2.5.
discard ce5d4e85e6 gnu: r-embedsom: Update to 2.2.1.
discard 8a48074404 gnu: r-shinystan: Enable all tests.
discard 994e55d0a4 gnu: r-janitor: Enable all tests.
discard d2afe8aea9 gnu: r-metafor: Replace custom phase with SKIPPED-TESTS
argument.
discard b6256e32b0 gnu: r-calculus: Replace custom phase with SKIPPED-TESTS
argument.
discard a5febec821 gnu: r-lgr: Enable all tests.
discard de1fd09e6d gnu: r-zzlite: Replace custom phase with SKIPPED-TESTS
argument.
discard 869d040245 gnu: r-paws-common: Replace custom phase with SKIPPED-TESTS
argument.
discard 56b5851ecc gnu: r-ggh4x: Replace custom phase with SKIPPED-TESTS
argument.
discard 6551bd2549 gnu: r-forestplot: Replace custom phase with SKIPPED-TESTS
argument.
discard b51a416e70 gnu: r-rliger: Update to 2.2.1.
discard a685f3680a gnu: r-bpcells: Do not build bundled highway library.
discard 95f23cd82c gnu: Add r-rcppplanc.
discard b1f2fe9f27 gnu: Add r-hdf5r-extra.
discard 134554deae gnu: Add r-easy-utils.
discard 318a159d28 gnu: Add r-highfive.
discard 35f72a76da gnu: r-xgboost: Enable all tests.
discard 122e026179 gnu: r-spam: Use SKIPPED-TESTS argument.
discard e83e5ac969 gnu: r-assertive-properties: Disable only one test.
discard e6caf49fcb gnu: r-pander: Be more explicit about disabling tests.
discard 708508e867 gnu: r-sessioninfo: Replace custom phase with test
arguments.
discard 6f961dd07a gnu: r-usethis: Replace custom phase with test arguments.
discard 4362b3b275 gnu: r-libcoin: Replace custom phase with test arguments.
discard 7c995e2c1c gnu: r-ggformula: Replace custom phase with test arguments.
discard bc505d0a3c gnu: r-reformulas: Replace custom phase with test arguments.
discard 989722a38a gnu: r-network: Enable all tests.
discard 4f32ff2293 gnu: r-shinytree: Replace custom phase with test arguments.
discard f443cca27c gnu: r-httptest2: Replace custom phase with test arguments.
discard f04f283901 gnu: r-zoo: Replace custom phase with test arguments.
discard d088e9e472 gnu: r-mosaiccore: Replace custom phase with test arguments.
discard f63833f6f8 gnu: r-dendextend: Enable all but one test.
discard 4060345f97 gnu: r-fitdistrplus: Enable all tests.
discard 43878b9e48 gnu: Add r-tables.
discard 8d62ff137a gnu: Add r-descr.
discard ed29e5fa44 gnu: Add r-merderiv.
discard 1b84eeae71 gnu: r-lme4: Skip one test.
discard c443c1659a gnu: r-rcppml: Update to 0.3.7.1.
discard 7c2383a520 gnu: r-robustbase: Replace custom phase with test arguments.
discard 24abc38ce4 build-system/r: Make test directory configurable.
discard c82d927438 gnu: r-with-tests, r-minimal: Update to 4.5.3.
discard abe0b38b91 gnu: r-rcppparallel: Use onetbb library.
discard a88614056a gnu: r-nanotime: Update to 0.3.13.
discard 19fcadbdde gnu: r-openmx: Update to 2.22.11.
discard c7b005d5c2 gnu: r-terra: Update to 1.9-1.
discard 8320537342 gnu: r-rcppalgos: Update to 2.10.0.
discard a260bd4aa7 gnu: r-ncdfcf: Update to 0.8.2.
discard 8f14b0d7b1 gnu: r-nanonext: Update to 1.8.1.
discard f5bcc9c0fe gnu: r-ctrdata: Update to 1.26.1.
discard d8f2ee075c gnu: r-pagoda2: Update to 1.0.14.
discard 1178beb30f gnu: r-phyloseq: Update to 1.54.2.
discard 60d17d41ce gnu: r-sparsearray: Update to 1.10.9.
discard b58cece0c6 gnu: r-enrichplot: Update to 1.30.5.
discard c1fafa339e gnu: r-systempiper: Update to 2.16.4.
discard f5332140c3 gnu: r-gsva: Update to 2.4.7.
discard f3846e4b9a gnu: r-anndatar: Update to 1.0.2.
discard 17144d26d3 gnu: r-textclean: Update to 0.9.7.
discard 4d2662beb9 gnu: r-ragg: Update to 1.5.1.
discard 7004d47cb4 gnu: r-textshaping: Update to 1.0.5.
discard 648f622252 gnu: r-forestplot: Update to 3.2.0.
discard 806d94fc54 gnu: r-actuar: Update to 3.3-7.
discard 7db7562005 gnu: r-systemfonts: Update to 1.3.2.
discard f0a8a253c1 gnu: r-leidenalg: Update to 1.1.6.
discard 86bddcae89 gnu: r-ggpattern: Update to 1.3.1.
discard dc5422b798 gnu: r-testit: Update to 0.17.
discard 38353ddf04 gnu: r-gmisc: Update to 3.2.0.
discard a013d00c5d gnu: r-ddrtree: Update to 0.1.6.
discard a0b32ce4ea gnu: r-rgl: Update to 1.3.36.
discard 8df619d336 gnu: r-rcppparallel: Update to 5.1.11-2.
discard b833645d87 gnu: r-lmertest: Update to 3.2-1.
discard dd4cfde651 gnu: r-libcoin: Update to 1.0-11.
discard 0b73774084 gnu: r-emmeans: Update to 2.0.2.
discard 2c921c61e4 gnu: r-nleqslv: Update to 3.3.6.
discard 898d8a9f69 gnu: r-flashclust: Update to 1.1-4.
discard 32b03321bb gnu: r-renv: Update to 1.1.8.
discard 113b9362e4 gnu: r-later: Update to 1.4.8.
discard 19ddda141e gnu: r-n2r: Update to 1.0.4.
discard 02869b8811 gnu: r-rmysql: Update to 0.11.2.
discard c207d25b58 gnu: r-partykit: Update to 1.2-26.
discard ae1ba02837 gnu: r-mirt: Update to 1.46.1.
discard b2cfe817e4 gnu: r-shinymeta: Update to 0.2.2.
discard e1bdba7fb1 gnu: r-httpgd: Update to 2.1.4.
discard 1a7ba19f08 gnu: r-highr: Update to 0.12.
discard 55d5333ee5 gnu: r-tglkmeans: Update to 0.6.1.
discard c9aa749e48 gnu: r-vegan: Update to 2.7-3.
discard 8b90e09367 gnu: r-mirai: Update to 2.6.1.
discard b6caeb2d0c gnu: r-lme4: Update to 2.0-1.
discard 4b4d9b249e gnu: r-ggstats: Update to 0.13.0.
discard 72db23a6f3 gnu: r-cubist: Update to 0.6.0.
discard 8610ab24b5 gnu: r-bayesfactor: Update to 0.9.12-4.8.
discard a9a14eb551 gnu: r-microbiomestat: Update to 1.4.
discard d02791ec2e gnu: r-codedepends: Update to 0.6.7.
discard 57543c270a gnu: r-xllim: Update to 2.3.1.
discard 26d07fda65 gnu: r-rcppgsl: Update to 0.3.14.
discard 0fc7abcff4 gnu: r-fs: Update to 1.6.7.
discard 613deb8a60 gnu: r-factoextra: Update to 2.0.0.
discard f692deb047 gnu: r-cvxr: Update to 1.8.1.
add ba55fa7ce6 gnu: librelane: Update to 3.0.0rc1.
add c1868b0dff gnu: python-yamlcore-0.0.2: Rename to python-yamlcore.
add 510baaaad8 gnu: Add python-meshtastic.
add 8a0495b6da gnu: python-mkdocs-material: Update to 7.3.6.
add f3e14dfa74 gnu: python-mkdocs-material: Switch to git-fetch.
add 16a8b177f1 gnu: python-fastbencode: Update to 0.3.9.
add 04637755e9 gnu: qtile: Downgrade to 0.33.0.
add 08c22e8ae0 gnu: linux-libre 6.19: Update to 6.19.6.
add e81a4e7004 gnu: linux-libre 6.18: Update to 6.18.16.
add 581031ba42 gnu: linux-libre 6.12: Update to 6.12.76.
add 5a9550f05f gnu: linux-libre 6.6: Update to 6.6.129.
add 23d9ea0275 gnu: linux-libre 6.1: Update to 6.1.166.
add 8d7155fcad gnu: linux-libre 5.15: Update to 5.15.202.
add df3dbf05e7 gnu: linux-libre 5.10: Update to 5.10.252.
add ae547c7606 gnu: linux-libre: Enable DMABUF kernel options.
add 4d2c9843f3 gnu: linux-libre-arm64-mnt-reform 6.18: Enable more FBCON
options.
add e5c98645a0 gnu: linux-libre-arm64-mnt-reform 6.12: Enable more FBCON
options.
add 392e16605b gnu: Add reform-debian-packages-for-6.19.
add 96f3b0e584 gnu: linux-libre-arm64-mnt-reform 6.19: New package.
add 85c935291a gnu: linux-libre: Enable DMABUF kernel options.
add b2ce49a331 gnu: cl-pathname-utils: Update to 1.1.0-5.c0aa51a.
add 9ee78c6796 gnu: cl-deploy: Update to 3.0.0-4.c9b869d.
add c8f6f78e56 gnu: cl-radiance: Update to 2.1.2-4.8249b00.
add 6ea5df94cf gnu: Add clasp-pathname-utils.
add b52ce9041a GNOME 48 marker.
add 4966ea6de3 Add news entries for GNOME 48.
add 5c9626bb36 gnu: qemu-minimal: Fix build for systems lacking ipxe-qemu
support.
add 66bdf01a27 gnu: qemu: Update to 10.2.1.
add 61e11fdd91 gnu: make-grub: Streamline.
add 9a47c5f06a gnu: grub: Update to 2.14.
add 9d131cf9ce gnu: grub-efi32: Fix cross-compilation.
add 6048910a4b gnu: grub-ieee1275: Limit supported systems to those where
tests pass.
add 007741a6f7 gnu: koboldcpp: Remove openblas from inputs.
add d86bff271a gnu: openfoam-org: Fix build.
add 7986689cb6 gnu: ctranslate2: Update to 4.7.1.
add 279410efb8 gnu: Add codex.
add fe1875c827 gnu: emacs-org-contacts: Update to 1.3.
add 1220325857 gnu: python-burr: Update to 0.42.0.
add 2a0428e3fc gnu: [email protected]: Add modules.
add d6567a6a17 gnu: emacs-org-contacts: Remove unused propagation.
add 06fccbd078 gnu: ddcutil: Update to 2.2.5.
add 14c46566c3 gnu: ddcui: Update to 0.6.0.
add 8143b0a37f gnu: imhex: Update to 1.38.1.
add 08b8cb91fd gnu: durden: Update to 0.6.3.
add cab232d5ac gnu: xarcan: Update to 0.7.1.
add c46d6a70b6 gnu: Remove arcan-wayland.
add a13f9f1514 gnu: p2pool: Update to 4.14.
add 1d831f0d44 gnu: monero-gui: Update to 0.18.4.7.
add b272a19ad5 gnu: bitcoin-cash-node: Update to 29.0.0.
add 7267c31058 gnu: electronics: Delete whitespace.
add 665ad66134 gnu: packages/electronics: Sort used modules.
add 82467ac1cd gnu: python-zipfile2: Move to python-compression.
add 1a3f2eebcb gnu: python-simplesat: Move to maths.
add a2cfd46081 gnu: stiff: Fix build by using CFLAGS=-fcommon.
add 2c43dcf299 gnu: stiff: Move to (gnu packages astronomy).
add b264415711 gnu: Remove python-virtualenv-for-hatch.
add 78b59a2e9d gnu: podman: Update to 5.8.1.
add e416c65984 gnu: cni-plugins: Update to 1.9.0.
add 3d270f4df2 gnu: gvisor-tap-vsock: Update to 0.8.8.
add f799b7fc1e gnu: orthanc: Update to 1.12.10.
add 07992d2593 gnu: orthanc-postgresql: Update to 10.0.
add 61ba412769 gnu: grub: Fix build for the 64bit Hurd.
add c2dcea8665 gnu: Update showmethekey to 1.21.0.
add a7ca954df5 gnu: units: Update to 2.26.
add 685d46774d gnu: wxwidgets: Update to 3.2.9.
add 3ec1e8297d Revert "gnu: Remove python-virtualenv-for-hatch."
add 7db0b45720 gnu: trealla: Update to 2.91.5.
add 7d622d4ded .forgejo: pull_request_template: Refer to tests.
add 2f61b27d36 .forgejo: pull_request_template: Fix empty line.
add 706541d384 gnu: genimage: Move to flashing-tools.
add 75ea9cb664 etc: snippets: Update python to pyproject build system.
add f8e3115edc gnu: nicotine+: Fix build.
add 60ba981d26 gnu: lisp-xyz: Shinmera repositories moved from GitHub to
Codeberg.
add 54225ed9ea gnu: vlc: Use latest ffmpeg.
add ad9ca26606 gnu: codex, codex-acp: Drop file_lock patches; enable
network-proxy.
add 89480bfd84 gnu: impass: Fix GTK and GObject inputs.
add 6e1866442e gnu: impass: Support sway.
add 5b4949858a gnu: emacs-calibre: Update to 1.5.2.
add cd29889ba4 gnu: portablexdr: Fix build.
add 9390336775 gnu: vlc: add VNC support.
add 6f3467de97 gnu: emacs-buttercup: Scope native-comp trampoline
workaround to spy-on.
add 650e69784d doc, gnu: Update URL of several packages formerly at
notabug.org.
add a395def329 news: Add 'pt' translation.
add e15407fc8e gnu: Add charlib.
add d5d7474992 gnu: horizon-eda: Move to electronics.
add 8f229b8fa5 gnu: horizon-eda: Update to 2.7.2.
add 12053f48d8 gnu: horizon-eda: Refresh package details.
add cbf6f04a9a gnu: lepton-eda: Move to electronics.
add 18ad7edfef gnu: lepton-eda: Refresh package details.
add a695af2308 gnu: weechat: Update to 4.8.2
add 4b58dad42b services: plasma-desktop: Adjust indentation.
add 249f30462b services: plasma-desktop: Enable udev configurations.
add a863c41caf gnu: plasma: Move bolt, fwupd and packagekit to inputs.
add a0424a2955 gnu: Add ianny.
add d981460e43 gnu: texinfo-7: Actually fix cross compiling.
add d1522cf229 gnu: libtsm: Update to 4.4.1.
add 78291f7cc6 gnu: kmscon: Update to 9.3.0.
add fd76b64acd gnu: Add python-simple-slurm.
add c917ece6d9 remote: Print output and error stream in ‘remote-eval’.
add 5b6b54c95c doc: Remove “Viewing Bugs within Emacs”.
add 4e78643fa7 doc: Move “Guile Studio” and “Vim and NeoVim” under “The
Perfect Setup”.
add 8926bfb5d0 doc: Add references to “The Perfect Setup”.
add cb9f187cc1 doc: Document Emacs-Guix for development.
add 29f630cb3e doc: Reintroduce mention of ‘bug-reference-mode’.
add f4298f390b gnu: audit: Build with aarch64 and arm support.
add fe9340179b gnu: buildah: Update to 1.43.0.
add c934a69a96 services: apcupsd-event-handlers: Fix G-expressions.
add d1776bd7ad gnu: conmon: Update to 2.2.1.
add 98d58347ee gnu: perl-finance-quote: Update to 1.68.
add 9232ada7cd gnu: guile-irregex: Update to 0.9.12.
add be7e3c6c67 gnu: guix: Update to 1.5.0-2.520785e315e.
add c2841810b9 gnu: Deprecate miniupnpc-next.
add d68439a78b gnu: Add jkqtplotter.
add 9cd60969f7 gnu: libmedfile: Update to 6.0.1.
add 358794b7d7 gnu: libmedfile: Switch to gexps.
add ed9e734518 gnu: quodlibet: Add GObject native input for tests.
add afa8b9ae47 gnu: Fix module cycle.
add 3bfe96cc49 gnu: dmd: Fix tests on 32bit systems.
add 670c723676 gnu: librewolf: Update to 148.0.2-2 [security-fixes].
add 7c7e8c2141 gnu: emacs-org-babel-eval-in-repl: Use Git, not MELPA.
add 2d743846a3 gnu: emacs-js-comint: Use Git, not MELPA.
add 05bb40bc48 gnu: emacs-alchemist: Use Git, not MELPA.
add 906d4e7046 gnu: yt-dlp: Update to 2026.03.13.
add e0c13fc717 gnu: trenchbroom: Update to 2025.4.
add 810513e4ef gnu: desktop-file-utils: Update to 0.28.
add c2b8e60f06 gnu: bluefish: Fix build.
add 5533b916cb gnu: stiff: Compile with optimizations and debugging
symbols.
add 45e45e1f79 gnu: rust-crates: Adjust indentation.
add 462e4f473f gnu: python-cocotbext-axi: Update to 0.1.28.
add 0b3b7b05d9 gnu: g-golf-adw-1-examples: Update to 0.8.4.
add 82983217d0 gnu: Add rust-1.94.
add 1166412420 gnu: fossil: Update to 2.28.
add 33d46b43ee gnu: foot: Update to 1.26.1.
add 8cc2c81735 gnu: got: Update to 0.123.
add e320469cf0 gnu: ovmf-aarch64: Pad firmware to 64 MiB for QEMU
compatibility.
add f0ba5b73a5 gnu: yggtray: Update to 0.1.15.
add 9de0072f0d gnu: hyprland: Update to 0.54.2.
add 72ac773a3e gnu: Add pueue.
add ce6dedf800 gnu: pueue: Install shell completions.
add 3abf9671be gnu: Add amberol.
add 6b188d65ee gnu: emacs-org-supertag: Update to 5.8.1.
add 4ee924eff7 gnu: emacs-markdown-mode: Update to 2.8.
add f42c735aeb gnu: emacs-w3m: Update to 20251229-0.ec18c21.
add aa189d44fd gnu: extra-cmake-modules: Update to 6.23.0.
add 339ca3756b gnu: kquickcharts: Update to 6.23.0.
add d2c923efd9 gnu: attica: Update to 6.23.0.
add 44d7bd0b78 gnu: bluez-qt: Update to 6.23.0.
add 1ab8f3eb7f gnu: breeze-icons: Update to 6.23.0.
add 3fdbf2a2ce gnu: kapidox: Update to 6.23.0.
add 6e8df1ea1a gnu: karchive: Update to 6.23.0.
add 6e4992fc2c gnu: kcalendarcore: Update to 6.23.0.
add 7b050f2731 gnu: kcodecs: Update to 6.23.0.
add 2b610cb2e5 gnu: kcolorscheme: Update to 6.23.0.
add 40fafb239d gnu: kconfig: Update to 6.23.0.
add 4a1f144efe gnu: kcoreaddons: Update to 6.23.0.
add 88009ead99 gnu: kdbusaddons: Update to 6.23.0.
add d00dfed008 gnu: kdnssd: Update to 6.23.0.
add 62737d710b gnu: kguiaddons: Update to 6.23.1.
add bc8153344c gnu: kholidays: Update to 6.23.0.
add 68016de92f gnu: ki18n: Update to 6.23.0.
add cf48ac1285 gnu: kidletime: Update to 6.23.0.
add ce3fda4b7d gnu: kirigami: Update to 6.23.1.
add 4027828f83 gnu: kitemmodels: Update to 6.23.0.
add 6c3b757d11 gnu: kitemviews: Update to 6.23.0.
add cab50f0e21 gnu: kplotting: Update to 6.23.0.
add 3cd537818e gnu: ksvg: Update to 6.23.0.
add 1c4d86c386 gnu: ksyntaxhighlighting: Update to 6.23.0.
add 98aac645f5 gnu: plasma-wayland-protocols: Update to 1.20.0.
add a97ab314bd gnu: kwidgetsaddons: Update to 6.23.0.
add 370b39965b gnu: kwindowsystem: Update to 6.23.0.
add ac5d3e0d83 gnu: modemmanager-qt: Update to 6.23.0.
add 402af4dd3b gnu: networkmanager-qt: Update to 6.23.0.
add 9b07deeaae gnu: prison: Update to 6.23.0.
add f3d427b6a7 gnu: pulseaudio-qt: Update to 1.8.1.
add 919a6ccb0b gnu: qqc2-desktop-style: Update to 6.23.0.
add 90214dcba7 gnu: solid: Update to 6.23.0.
add 2e21984b91 gnu: sonnet: Update to 6.23.0.
add 98afc8df18 gnu: threadweaver: Update to 6.23.0.
add 43b6555751 gnu: kauth: Update to 6.23.0.
add 67aef8de6f gnu: kcompletion: Update to 6.23.0.
add e47d90a075 gnu: kcontacts: Update to 6.23.0.
add b7d1f23b61 gnu: kcrash: Update to 6.23.0.
add 50317dddac gnu: kdoctools: Update to 6.23.0.
add 130af24203 gnu: kfilemetadata: Update to 6.23.0.
add 6cf55aefb4 gnu: kimageformats: Update to 6.23.0.
add 3c89fa1fa3 gnu: kjobwidgets: Update to 6.23.0.
add deaec02d17 gnu: knotifications: Update to 6.23.0.
add b159265810 gnu: kpackage: Update to 6.23.0.
add d6bca986c8 gnu: kpty: Update to 6.23.0.
add 4b82187b53 gnu: kunitconversion: Update to 6.23.0.
add 7021f1f783 gnu: syndication: Update to 6.23.0.
add bcd8acfdd8 gnu: baloo: Update to 6.23.0.
add 35015cf880 gnu: kbookmarks: Update to 6.23.0.
add c8504a2461 gnu: kcmutils: Update to 6.23.0.
add cf6b2395c3 gnu: kconfigwidgets: Update to 6.23.0.
add 1990b69b6f gnu: kdeclarative: Update to 6.23.0.
add d6e501952a gnu: kded: Update to 6.23.0.
add 25cd0d36fd gnu: kdesu: Update to 6.23.0.
add 6eef98e264 gnu: kglobalaccel: Update to 6.23.0.
add 937fb5cfff gnu: kiconthemes: Update to 6.23.0.
add 3da63d5241 gnu: kio: Update to 6.23.0.
add 68f2f89fb1 gnu: kirigami-addons: Update to 1.12.0.
add 2e6973a146 gnu: knewstuff: Update to 6.23.0.
add dd7a2adc5f gnu: knotifyconfig: Update to 6.23.0.
add 6b3c70ed3f gnu: kparts: Update to 6.23.0.
add 8bb962347b gnu: kpeople: Update to 6.23.0.
add 8891803d94 gnu: krunner: Update to 6.23.0.
add 6cb15b89f5 gnu: kservice: Update to 6.23.1.
add 11e8f8576b gnu: kstatusnotifieritem: Update to 6.23.0.
add d56724d788 gnu: ktexteditor: Update to 6.23.0.
add f5443df2f3 gnu: ktextwidgets: Update to 6.23.0.
add 6517a723f5 gnu: ktexttemplate: Update to 6.23.0.
add a079c0873c gnu: kwallet: Update to 6.23.0.
add cf01229e67 gnu: kxmlgui: Update to 6.23.0.
add fce64471d8 gnu: purpose: Update to 6.23.0.
add 4cd7e58dd9 gnu: ktextaddons: Update to 2.0.0.
add 8bdc83a0a9 gnu: kde-frameworkintegration: Update to 6.23.0.
add a57edfd158 gnu: kdav: Update to 6.23.0.
add 58deaa03b5 gnu: polkit-kde-agent: Add missing input.
add 21dc3404be gnu: claws-mail: Update to 4.4.0.
add fa67dd643e teams: Add Version control team.
add 7eae2b1f1b teams: Add Thanos Apollo to vcs team.
add a3bb442b03 teams: Add Ashish SHUKLA to vcs team.
add 8887b63a70 teams: Add Nguyễn Gia Phong to vcs team.
add eb42e9b76c gnu: sameboy: Update to 1.0.3.
add 9e17346b66 gnu: Add python-catppuccin.
add 3656139f7e maths: openblas: Enable OpenMP support.
add 4024e13a98 maths: openblas: Update to 0.3.31.
add 36a29d4299 gnu: shaderc: Update to 2025.5.
add bb66172a0b gnu: vulkan-utility-libraries: Update to 1.4.335.0.
add 758c9c6431 gnu: vulkan-volk: Update to 1.4.335.0.
add 2e0f0de669 gnu: vulkan-loader: Update to 1.4.335.0.
add c3f1306d64 gnu: vulkan-headers/no-loader: Update to 1.4.335.0.
add 75ed45e456 gnu: glslang: Update to 1.4.335.0.
add 8556b8ab61 gnu: spirv-cross: Update to 1.4.335.0.
add baa79d6d09 gnu: spirv-tools: Update to 1.4.335.0.
add 6ea151888c gnu: spirv-headers: Update to 1.4.335.0.
add 9b6f14eb0e gnu: vulkan-tools: Update to 1.4.335.
add 1f33c9bf11 gnu: Add spirv-tools-static.
add 78889d16fa gnu: vulkan-validationlayers: Update to 1.4.335.0.
add fff3eb95b9 gnu: openblas: Use cmake build system.
add 49c849438a gnu: hwloc-2: Update to 2.13.0.
add 0f4c29ef1d gnu: hwloc-2: Add support for opencl, levelzero and libxml2.
add ae909b7183 gnu: Add rocm-validationsuite.
add 6390a0c6ad gnu: libfabric: Activate ROCm support.
add db2a92f45a gnu: libfabric: Fix indentation.
add 7739b4dd8f gnu: ucx: Activate ROCm support.
add cf5b8dce21 gnu: hwloc: Switch to G-expressions.
add f380c63da4 gnu: hwloc-2: Fix OpenCL linking error for dependents.
add fb34cb983a gnu: hwloc-2: Enable ROCm support.
add af3900a316 gnu: openmpi-4: Don't mix quasiquotes with G-exps.
add 1205f53f8d gnu: Add openmpi-rocm, an Open MPI variant with ROCm
support.
add 0b6aa1b1c6 gnu: rocm-cmake: Fix dependency on julia.
add a7f560f3b2 gnu: Add %opencl-version.
add f422f735b2 gnu: Add opencl-headers-2022.
add 60b6df6b04 gnu: %opencl-version: Update to 2025.07.22.
add de90188eea gnu: openblas: Correctly pass make flags, switch tests on.
add d979b1b459 gnu: Register missing patch.
add e7e88eb534 gnu: inferno: Fix gcc 14 build.
add 89684bbd9e gnu: Add ghc-lrucache.
add abfe0525fe gnu: Add ghc-hakyll.
add 8d77443b1c gnu: miniupnpc: Remove unused native input.
add 58e2d9ad56 gnu: tidyall: Update to 0.85 and fix tests.
add 477d6f83dc gnu: emacs-transmission: Update to 0.12.2-0.ae36637.
add 0ca814a5b0 gnu: keepass: Update to 2.61.
add 851d02997a teams: Add Spencer King to the Julia team.
add d2de7901e6 gnu: breezy: Install man-pages, bash-completion add bzr
symlink.
add 4750a7657d gnu: ikiwiki: Fix bazaar test with breezy bzr.
new 66cdacf7b5 gnu: r-cvxr: Update to 1.8.1.
new 9e52ae09e8 gnu: r-factoextra: Update to 2.0.0.
new 6843d0fb32 gnu: r-fs: Update to 1.6.7.
new ce2c944404 gnu: r-rcppgsl: Update to 0.3.14.
new d5d23c2b9c gnu: r-xllim: Update to 2.3.1.
new 04d0d0391e gnu: r-codedepends: Update to 0.6.7.
new a4a79d19e5 gnu: r-microbiomestat: Update to 1.4.
new 5fc32435df gnu: r-bayesfactor: Update to 0.9.12-4.8.
new c7f1de0947 gnu: r-cubist: Update to 0.6.0.
new 256363c4fa gnu: r-ggstats: Update to 0.13.0.
new 98b1ecb9a2 gnu: r-lme4: Update to 2.0-1.
new 2f1de99ab9 gnu: r-mirai: Update to 2.6.1.
new d71e4bf881 gnu: r-vegan: Update to 2.7-3.
new 0e3130b6aa gnu: r-tglkmeans: Update to 0.6.1.
new af59ecb8f0 gnu: r-highr: Update to 0.12.
new 38414e0d6e gnu: r-httpgd: Update to 2.1.4.
new b0be748bf1 gnu: r-shinymeta: Update to 0.2.2.
new ce935dda50 gnu: r-mirt: Update to 1.46.1.
new 93ff29c389 gnu: r-partykit: Update to 1.2-26.
new 95e0a6e968 gnu: r-rmysql: Update to 0.11.2.
new 73b2b497c9 gnu: r-n2r: Update to 1.0.4.
new 6e51ee5e45 gnu: r-later: Update to 1.4.8.
new 2d172dc167 gnu: r-renv: Update to 1.1.8.
new 6f496c2657 gnu: r-flashclust: Update to 1.1-4.
new d59b55d7c6 gnu: r-nleqslv: Update to 3.3.6.
new 1af4716965 gnu: r-emmeans: Update to 2.0.2.
new 3f25fc9376 gnu: r-libcoin: Update to 1.0-11.
new 0012430a61 gnu: r-lmertest: Update to 3.2-1.
new 226028c9ec gnu: r-rcppparallel: Update to 5.1.11-2.
new faa5adf46c gnu: r-rgl: Update to 1.3.36.
new eb0d27378f gnu: r-ddrtree: Update to 0.1.6.
new 8562edbef3 gnu: r-gmisc: Update to 3.2.0.
new 5df0af0cc6 gnu: r-testit: Update to 0.17.
new 9c584df61b gnu: r-ggpattern: Update to 1.3.1.
new f2f0799f2f gnu: r-leidenalg: Update to 1.1.6.
new 969e2a0f2a gnu: r-systemfonts: Update to 1.3.2.
new 16f466a9eb gnu: r-actuar: Update to 3.3-7.
new 783caeb377 gnu: r-forestplot: Update to 3.2.0.
new 0ef682fcc0 gnu: r-textshaping: Update to 1.0.5.
new bc0e15e392 gnu: r-ragg: Update to 1.5.1.
new 0630f55b25 gnu: r-textclean: Update to 0.9.7.
new f177758ea1 gnu: r-anndatar: Update to 1.0.2.
new ea92ed3a48 gnu: r-gsva: Update to 2.4.7.
new 1f1c1bf64d gnu: r-systempiper: Update to 2.16.4.
new 36881ed64f gnu: r-enrichplot: Update to 1.30.5.
new 23e23db5b9 gnu: r-sparsearray: Update to 1.10.9.
new 340d0979cd gnu: r-phyloseq: Update to 1.54.2.
new c4949ffab9 gnu: r-pagoda2: Update to 1.0.14.
new f3eda2373b gnu: r-ctrdata: Update to 1.26.1.
new ddeb32ab29 gnu: r-nanonext: Update to 1.8.1.
new 21fc87dde6 gnu: r-ncdfcf: Update to 0.8.2.
new e06890ee41 gnu: r-rcppalgos: Update to 2.10.0.
new 44f8fc8902 gnu: r-terra: Update to 1.9-1.
new 82738cdf43 gnu: r-openmx: Update to 2.22.11.
new 62f32903c0 gnu: r-nanotime: Update to 0.3.13.
new cecf0ece1b gnu: r-rcppparallel: Use onetbb library.
new a83006f54c gnu: r-with-tests, r-minimal: Update to 4.5.3.
new 169a02d042 build-system/r: Make test directory configurable.
new 0a95cf8e8a gnu: r-robustbase: Replace custom phase with test arguments.
new 9850b25c9d gnu: r-rcppml: Update to 0.3.7.1.
new fdd411c933 gnu: r-lme4: Skip one test.
new b9ed89b9b0 gnu: Add r-merderiv.
new e9233ce45d gnu: Add r-descr.
new d821692bf2 gnu: Add r-tables.
new a0a57d5dcb gnu: r-fitdistrplus: Enable all tests.
new 38a8b61efa gnu: r-dendextend: Enable all but one test.
new 66d0fca1b8 gnu: r-mosaiccore: Replace custom phase with test arguments.
new e767212aa0 gnu: r-zoo: Replace custom phase with test arguments.
new b41b6635d5 gnu: r-httptest2: Replace custom phase with test arguments.
new 32fa0f9422 gnu: r-shinytree: Replace custom phase with test arguments.
new fe710c78c1 gnu: r-network: Enable all tests.
new 74aa0130fa gnu: r-reformulas: Replace custom phase with test arguments.
new ce9da89f94 gnu: r-ggformula: Replace custom phase with test arguments.
new a1d0922451 gnu: r-libcoin: Replace custom phase with test arguments.
new 4044d02571 gnu: r-usethis: Replace custom phase with test arguments.
new cf4eaf4a85 gnu: r-sessioninfo: Replace custom phase with test
arguments.
new e77ee8f057 gnu: r-pander: Be more explicit about disabling tests.
new 110bdec46a gnu: r-assertive-properties: Disable only one test.
new 2be66aa9b6 gnu: r-spam: Use SKIPPED-TESTS argument.
new 20fc9c7311 gnu: r-xgboost: Enable all tests.
new 179319d5b0 gnu: Add r-highfive.
new 4ca2445e97 gnu: Add r-easy-utils.
new 11b2eb670f gnu: Add r-hdf5r-extra.
new 636d2176b7 gnu: Add r-rcppplanc.
new d845ae5ba4 gnu: r-bpcells: Do not build bundled highway library.
new 8848f7bc3e gnu: Remove r-swne.
new 63e08113c1 gnu: r-rliger: Update to 2.2.1.
new a6e3930e85 gnu: r-forestplot: Replace custom phase with SKIPPED-TESTS
argument.
new 855af1ff38 gnu: r-ggh4x: Replace custom phase with SKIPPED-TESTS
argument.
new 183600e8fb gnu: r-paws-common: Replace custom phase with SKIPPED-TESTS
argument.
new cd3ed541d8 gnu: r-zzlite: Replace custom phase with SKIPPED-TESTS
argument.
new 1f9fb026cb gnu: r-lgr: Enable all tests.
new c40618db88 gnu: r-calculus: Replace custom phase with SKIPPED-TESTS
argument.
new 3ea4d35ca2 gnu: r-metafor: Replace custom phase with SKIPPED-TESTS
argument.
new bc5907e993 gnu: r-janitor: Enable all tests.
new 1eb89a5e99 gnu: r-shinystan: Enable all tests.
new 07896bd076 gnu: r-embedsom: Update to 2.2.1.
new 6e6e68f131 gnu: r-astsa: Update to 2.5.
new 41d43e9ecb gnu: r-party: Update to 1.3-19.
new 831b5b60a1 gnu: r-rcppde: Update to 0.1.9.
new ed596b13b1 gnu: r-adbcdrivermanager: Update to 0.22.0-1.
new 67e0c89e8e gnu: r-multcomp: Update to 1.4-30.
new 43096dc63a gnu: r-effectsize: Update to 1.0.2.
new 9e0b9cf069 gnu: r-listenv: Update to 0.10.1.
new a96c4e6fce gnu: r-rjava: Update to 1.0-15.
new d6e1d7ba02 gnu: r-spatstat-utils: Update to 3.2-2.
new 137766c3e6 gnu: r-exactranktests: Update to 0.8-36.
new a5ebaa287c gnu: r-systempiperdata: Update to 2.14.6.
new f809d4e9ea gnu: Add r-pingr.
new c731c119a5 gnu: Add r-pak.
new ca25716da7 gnu: Add r-qrng.
new 3b85cd9924 gnu: r-devtools: Update to 2.5.0.
new 67768169f0 gnu: r-prodlim: Update to 2026.03.11.
new f93fb6789f gnu: r-huge: Update to 1.5.
new 52db83caaa gnu: r-activedriverwgs: Update to 1.2.1.
new 6cfa50de11 gnu: r-bma: Update to 3.18.21.
new 3104305073 gnu: r-multilevel: Update to 2.8.
new 09d5cad390 gnu: r-mvtnorm: Update to 1.3-6.
new 78a62eab02 gnu: r-partykit: Update to 1.2-27.
new 392aa1249f gnu: r-rmumps: Update to 5.2.1-41.
new f053aba09d gnu: r-squarem: Update to 2026.1.
new 783caf337b gnu: r-arm: Update to 1.15-1.
new 95a86acf8a gnu: r-globals: Update to 0.19.1.
new 61edc75d87 gnu: r-future: Update to 1.70.0.
new fa7c995fa4 gnu: r-shinybs: Update to 0.64.0.
new f74fd1b3e2 gnu: r-units: Update to 1.0-1.
new 5375506856 gnu: r-rjava: Update to 1.0-16.
new c8ba8fbb33 gnu: r-msigdbr: Update to 26.1.0.
new 354f420d85 gnu: r-png: Update to 0.1-9.
new a88ce5b274 gnu: r-cyclocomp: Update to 1.1.2.
new 51aeab3b34 gnu: r-protolite: Update to 2.4.0.
new 6ef69454dd gnu: r-duckdb: Update to 1.5.0.
This update added new revisions after undoing existing revisions.
That is to say, some revisions that were in the old version of the
branch are not in the new version. This situation occurs
when a user --force pushes a change and generates a repository
containing something like this:
* -- * -- B -- O -- O -- O (85ad1eac71)
\
N -- N -- N refs/heads/r-team (6ef69454dd)
You should already have received notification emails for all of the O
revisions, and so the following emails describe only the N revisions
from the common base, B.
Any revisions marked "omit" are not gone; other references still
refer to them. Any revisions marked "discard" are gone forever.
The 132 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "add" were already present in the repository and have only
been added to this reference.
Summary of changes:
.forgejo/pull_request_template.md | 6 +-
CODEOWNERS | 9 +
NEWS | 4 +
doc/contributing.texi | 200 +-
doc/guix-cookbook.texi | 3 +
doc/guix.texi | 6 +
etc/news.scm | 44 +
etc/snippets/yas/scheme-mode/guix-package | 2 +-
etc/teams.scm | 31 +-
gnu/local.mk | 13 +-
gnu/packages/admin.scm | 11 +-
gnu/packages/arcan.scm | 140 +-
gnu/packages/astronomy.scm | 27 +
gnu/packages/bioconductor.scm | 58 +-
gnu/packages/bioinformatics.scm | 48 -
gnu/packages/bootloaders.scm | 97 +-
gnu/packages/check.scm | 6 +-
gnu/packages/codex.scm | 411 +++
gnu/packages/containers.scm | 84 +-
gnu/packages/cran.scm | 182 +-
gnu/packages/dlang.scm | 7 +
gnu/packages/duckdb.scm | 4 +-
gnu/packages/electronics.scm | 278 +-
gnu/packages/emacs-build.scm | 4 +-
gnu/packages/emacs-xyz.scm | 296 +-
gnu/packages/emulators.scm | 7 +-
gnu/packages/engineering.scm | 225 +-
gnu/packages/fabric-management.scm | 7 +-
gnu/packages/finance.scm | 12 +-
gnu/packages/firmware.scm | 12 +-
gnu/packages/flashing-tools.scm | 124 +-
gnu/packages/freedesktop.scm | 8 +-
gnu/packages/game-development.scm | 16 +-
gnu/packages/genimage.scm | 154 -
gnu/packages/gnome-circle.scm | 77 +
gnu/packages/gnome.scm | 16 +-
gnu/packages/gnupg.scm | 2 +-
gnu/packages/guile-xyz.scm | 30 +-
gnu/packages/guile.scm | 12 +-
gnu/packages/hardware.scm | 8 +-
gnu/packages/haskell-xyz.scm | 89 +
gnu/packages/hexedit.scm | 16 +-
gnu/packages/image-processing.scm | 22 -
gnu/packages/inferno.scm | 6 +-
gnu/packages/irc.scm | 4 +-
gnu/packages/kde-frameworks.scm | 385 +--
gnu/packages/kde-plasma.scm | 8 +-
gnu/packages/librewolf.scm | 8 +-
gnu/packages/linux.scm | 429 ++-
gnu/packages/lisp-xyz.scm | 234 +-
gnu/packages/machine-learning.scm | 11 +-
gnu/packages/mail.scm | 5 +-
gnu/packages/maths.scm | 70 +-
gnu/packages/medical.scm | 16 +-
gnu/packages/mpi.scm | 239 +-
gnu/packages/music.scm | 2 +
gnu/packages/networking.scm | 4 +-
gnu/packages/nicotine.scm | 4 +-
gnu/packages/opencl.scm | 31 +-
gnu/packages/package-management.scm | 8 +-
gnu/packages/parallel.scm | 45 +
gnu/packages/password-utils.scm | 18 +-
.../codex-0.98.0-remove-patch-sections.patch | 30 +
...-1.38-native-comp-spy-on-trampoline-scope.patch | 92 +
gnu/packages/patches/genimage-mke2fs-test.patch | 40 -
gnu/packages/patches/grub-hurd64.patch | 32 -
gnu/packages/patches/hwloc-add-with-opencl.patch | 90 +
.../patches/rust-codex-0.98.0-arg0-file-lock.patch | 89 -
.../patches/rust-codex-0.98.0-core-file-lock.patch | 91 -
.../rust-codex-0.98.0-execpolicy-file-lock.patch | 49 -
.../patches/rust-codex-0.98.0-test-shebangs.patch | 56 +
.../patches/rust-codex-0.98.0-test-timeout.patch | 20 +
...x-0.98.0-windows-sandbox-protocol-version.patch | 23 +
gnu/packages/prolog.scm | 4 +-
gnu/packages/python-compression.scm | 24 +
gnu/packages/python-xyz.scm | 166 +-
gnu/packages/qt.scm | 36 +-
gnu/packages/radio.scm | 53 +
gnu/packages/rocm-libs.scm | 22 +
gnu/packages/rocm.scm | 2 +-
gnu/packages/rust-apps.scm | 96 +-
gnu/packages/rust-crates.scm | 3187 ++++++++++++++++----
gnu/packages/rust-sources.scm | 112 +-
gnu/packages/rust.scm | 60 +
gnu/packages/simulation.scm | 4 +-
gnu/packages/statistics.scm | 54 -
gnu/packages/task-management.scm | 56 +
gnu/packages/terminals.scm | 194 +-
gnu/packages/texinfo.scm | 15 +-
gnu/packages/upnp.scm | 16 +-
gnu/packages/version-control.scm | 40 +-
gnu/packages/video.scm | 14 +-
gnu/packages/virtualization.scm | 8 +-
gnu/packages/vulkan.scm | 147 +-
gnu/packages/web.scm | 8 +-
gnu/packages/wm.scm | 9 +-
gnu/packages/wxwidgets.scm | 5 +-
gnu/services/desktop.scm | 19 +-
gnu/services/power.scm | 94 +-
gnu/system/image.scm | 2 +-
guix/remote.scm | 40 +-
m4/guix.m4 | 2 +-
po/packages/POTFILES.in | 1 -
103 files changed, 6593 insertions(+), 2844 deletions(-)
create mode 100644 gnu/packages/codex.scm
delete mode 100644 gnu/packages/genimage.scm
create mode 100644
gnu/packages/patches/codex-0.98.0-remove-patch-sections.patch
create mode 100644
gnu/packages/patches/emacs-buttercup-1.38-native-comp-spy-on-trampoline-scope.patch
delete mode 100644 gnu/packages/patches/genimage-mke2fs-test.patch
delete mode 100644 gnu/packages/patches/grub-hurd64.patch
create mode 100644 gnu/packages/patches/hwloc-add-with-opencl.patch
delete mode 100644 gnu/packages/patches/rust-codex-0.98.0-arg0-file-lock.patch
delete mode 100644 gnu/packages/patches/rust-codex-0.98.0-core-file-lock.patch
delete mode 100644
gnu/packages/patches/rust-codex-0.98.0-execpolicy-file-lock.patch
create mode 100644 gnu/packages/patches/rust-codex-0.98.0-test-shebangs.patch
create mode 100644 gnu/packages/patches/rust-codex-0.98.0-test-timeout.patch
create mode 100644
gnu/packages/patches/rust-codex-0.98.0-windows-sandbox-protocol-version.patch
