Ricardo Wurmus <[email protected]> writes:
> * gnu/packages/bioinformatics.scm (multiqc): New variable.
> ---
> gnu/packages/bioinformatics.scm | 30 ++++++++++++++++++++++++++++++
> 1 file changed, 30 insertions(+)
>
> diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
> index 04ed769..45595d0 100644
> --- a/gnu/packages/bioinformatics.scm
> +++ b/gnu/packages/bioinformatics.scm
> @@ -5321,3 +5321,33 @@ group or two ChIP groups run under different
> conditions.")
> (description "This program compares version strings. It intends to be
> a
> replacement for strverscmp.")
> (license license:gpl3+))))
> +
> +(define-public multiqc
> + (package
> + (name "multiqc")
> + (version "0.6")
> + (source
> + (origin
> + (method url-fetch)
> + (uri (string-append
> +
> "https://pypi.python.org/packages/23/d9/95a5e62eea95f220007d7a6683d0da1ee1d9f99e6932bcff793b6601ef15/multiqc-";
> + version ".tar.gz"))
> + (sha256
> + (base32
> + "0avw11h63ldpxy5pizc3wl1wa01ha7q10wb240nggsjz3jaqvyiy"))))
> + (build-system python-build-system)
> + (propagated-inputs
> + `(("python-jinja2" ,python-jinja2)
> + ("python-simplejson" ,python-simplejson)
> + ("python-pyyaml" ,python-pyyaml)
> + ("python-click" ,python-click)
> + ("python-matplotlib" ,python-matplotlib)))
I sent this patch too early. The final version also has “python-numpy”
among its propagated inputs. Other than that there are no changes.
> + (native-inputs
> + `(("python-setuptools" ,python-setuptools)))
> + (home-page "http://multiqc.info";)
> + (synopsis "Aggregate bioinformatics analysis reports")
> + (description
> + "MultiQC is a tool to aggregate bioinformatics results across many
> +samples into a single report. It contains modules for a large number of
> +common bioinformatics tools.")
> + (license license:gpl3)))
