Marius Bakke <mba...@fastmail.com> writes: > The program seems to bundle {khash,kseq}.h from htslib. Could you try > replacing them with the files directly from htslib? There are quite a > few examples of doing this already in bioinformatics.scm.
The released version bundles a few unnecessary header files as well, that are removed in git. I think you can remove all ".h" files in an origin snippet and substitute references to khash.h and kseq.h before building. Cheers, Marius