I think I can answer this one as it's in my to do list as well. I
would use python to do this for you. There is an example here [0].

But if anyone has a homemade code it would be great if you can share it.

[0] http://gwyddion.net/documentation/pygwy.php




On 5/25/11, Denny Köhler <[email protected]> wrote:
> Hello all,
>
> I'm in search of a possibility to do some batch processing to my data.
> The problem is that I have somewhat 50 data files with each containing
> lets say 8 channels and I want to do some line wise averaging and then
> save each of those resulting graphs as a .txt file. So that means I have
> to do this about 400 times, which I want to do automatically. So is
> there a possibility to tell gwyddion to load every file in a directory
> and tell it to do the same thing to all the channels in all the files?
>
> Thanks in advance and kind regards,
> Denny
>
>
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-- 
Andrés Muñiz-Piniella

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