On Tue, Oct 08, 2013 at 03:33:42PM +0200, David Nečas (Yeti) wrote:
> I modified your script so that it works
And now I even attached it...
Yeti
#################################################
# process_afm.py
import os, sys, gwy
plugin_menu = "/Process AFM Image"
plugin_type = "PROCESS"
plugin_desc = "Process currently active file"
def run():
c = gwy.gwy_app_data_browser_get_current(gwy.APP_CONTAINER)
process_container(c)
# I make this a separate function so I can call it from other scripts
def process_container(c):
gwy.gwy_process_func_run("line_correct_median", c, gwy.RUN_IMMEDIATE)
gwy.gwy_process_func_run("scars_remove", c, gwy.RUN_IMMEDIATE)
dfields = get_data_fields_dir(c)
d = dfields['/0/data']
w = d.get_xres()
h = d.get_yres()
d.fit_lines(0,0,w,h,3,False,gwy.ORIENTATION_VERTICAL)
d.data_changed()
def get_data_fields_dir(container):
"""
Get list of available datafield stored in given container as directory
where key is key name and value is DataField object.
@param container: gwy.Container with datafields
@return: a directory of datafields
"""
d = {}
for key in container.keys_by_name():
x = container.get_value_by_name(key)
if type(x) is gwy.DataField:
d[key] = x
return d
#################################################
# process_all.py
# This calls another script I wrote so I need to import it.
import os, sys, gwy
sys.path.append(os.environ['HOME'] + '/.gwyddion/pygwy')
import process_afm
plugin_menu = "/Process All Opened Files"
plugin_type = "PROCESS"
plugin_desc = "Process all opened files"
def run():
cons = gwy.gwy_app_data_browser_get_containers()
for c in cons:
gwy.gwy_app_data_browser_select_data_field(c, 0)
process_afm.process_container(c)
------------------------------------------------------------------------------
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