I'm trying to understand the cause of a table scan when doing a select 
through a join table for a many-to-many relationship. Tables are "probes" 
and "scores". The join table is called "join" (perhaps should be renamed).

Written as follows, it appears to be using the indexes:

explain SELECT * FROM `probes` LEFT JOIN `joins` ON `joins`.`pid` = 
`probes`.`id` LEFT JOIN `scores` ON `scores`.`id` = `sid` WHERE 
`probes`.`exp` = 4
SELECT
    PROBES.ID,
    PROBES.EXP,
    PROBES.NAME,
    JOINS.PID,
    JOINS.I,
    JOINS.SID,
    SCORES.ID,
    SCORES.EXPSCORES
FROM PUBLIC.PROBES
    /* PUBLIC.PROBE_NAME: EXP = 4 */
    /* WHERE PROBES.EXP = 4
    */
LEFT OUTER JOIN PUBLIC.JOINS
    /* PUBLIC.INDEX_PID: PID = PROBES.ID */
    ON JOINS.PID = PROBES.ID
LEFT OUTER JOIN PUBLIC.SCORES
    /* PUBLIC.PRIMARY_KEY_9: ID = SID */
    ON SCORES.ID = SID
WHERE PROBES.EXP = 4

But the library I'm using put parentheses around the first join:

explain SELECT * FROM (`probes` LEFT JOIN `joins` ON `joins`.`pid` = 
`probes`.`id`) LEFT JOIN `scores` ON `scores`.`id` = `sid` WHERE 
`probes`.`exp` = 4
SELECT
    PROBES.ID,
    PROBES.EXP,
    PROBES.NAME,
    JOINS.PID,
    JOINS.I,
    JOINS.SID,
    SCORES.ID,
    SCORES.EXPSCORES
FROM (
    PUBLIC.PROBES
        /* PUBLIC.PROBE_NAME: EXP = 4 */
    LEFT OUTER JOIN PUBLIC.JOINS
        /* PUBLIC.INDEX_PID: PID = PROBES.ID */
        ON JOINS.PID = PROBES.ID
)
LEFT OUTER JOIN PUBLIC.SCORES
    /* PUBLIC.SCORES.tableScan */
    ON SCORES.ID = SID
WHERE PROBES.EXP = 4

Now there's a table scan.

What's the difference between these two queries?

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