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https://issues.apache.org/jira/browse/HBASE-1141?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=12665288#action_12665288
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Jonathan Gray commented on HBASE-1141:
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We're looking into this because our most common query is:  
get_all_columns(table, row, family)

When this is a smaller number of columns, our random access times are on the 
order of 2ms.  But if there are a few thousand columns in the family, this can 
take >100ms.

Certainly there are some inefficiencies in a query like this because you must 
check all stores, but even when serving out of memory (the new cache Erik is 
designing) there is a significant performance hit to having many columns.

Erik has done some timing and can post what he has found.

> Fetching large numbers of columns is slow outside of HDFS
> ---------------------------------------------------------
>
>                 Key: HBASE-1141
>                 URL: https://issues.apache.org/jira/browse/HBASE-1141
>             Project: Hadoop HBase
>          Issue Type: Bug
>    Affects Versions: 0.20.0
>            Reporter: Jonathan Gray
>             Fix For: 0.20.0
>
>
> While working on a Cell cache, we have found during random-read tests that 
> the number of columns has an enormous impact on performance.  Accounting for 
> increased HDFS access time, there is still a great deal of time being spent 
> coming out of the Region and then across the wire to HTable.
> Erik Holstad has done this testing and will post some of his results here 
> when completed.

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