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https://issues.apache.org/jira/browse/HBASE-1876?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=12789818#action_12789818
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stack commented on HBASE-1876:
------------------------------
I undid bundling an hadoop-hdfs patched with hdfs-630 being part of hbase
deploy.
> DroppedSnapshotException when flushing memstore after a datanode dies
> ---------------------------------------------------------------------
>
> Key: HBASE-1876
> URL: https://issues.apache.org/jira/browse/HBASE-1876
> Project: Hadoop HBase
> Issue Type: Bug
> Components: regionserver
> Affects Versions: 0.20.0
> Reporter: Cosmin Lehene
> Priority: Critical
> Fix For: 0.21.0
>
> Original Estimate: 24h
> Remaining Estimate: 24h
>
> A dead datanode in the cluster can lead to multiple HRegionServer failures
> and corrupted data. The HRegionServer failures can be reproduced
> consistently on a 7 machines cluster with approx 2000 regions.
> Steps to reproduce
> The easiest and safest way is to reproduce it for the .META. table, however
> it will work with any table.
> Locate a datanode that stores the .META. files and kill -9 it.
> In order to get multiple writes to the .META. table bring up or shut down a
> region server this will eventually cause a flush on the memstore
> 2009-09-25 09:26:17,775 DEBUG org.apache.hadoop.hbase.regionserver.HRegion:
> Flush requested on
> .META.,demo__assets,asset_283132172,1252898166036,1253265069920
> 2009-09-25 09:26:17,775 DEBUG org.apache.hadoop.hbase.regionserver.HRegion:
> Started memstore flush for region
> .META.,demo__assets,asset_283132172,1252898166036,1253265069920. Current
> region memstore si
> ze 16.3k
> 2009-09-25 09:26:17,791 INFO org.apache.hadoop.hdfs.DFSClient: Exception in
> createBlockOutputStream java.io.IOException: Bad connect ack with
> firstBadLink 10.72.79.108:50010
> 2009-09-25 09:26:17,791 INFO org.apache.hadoop.hdfs.DFSClient: Abandoning
> block blk_-8767099282771605606_176852
> The DFSClient will retry for 3 times, but there's a high chance it will try
> on the same failed datanode (it takes around 10 minutes for dead datanode to
> be removed from cluster)
> 2009-09-25 09:26:41,810 WARN org.apache.hadoop.hdfs.DFSClient: DataStreamer
> Exception: java.io.IOException: Unable to create new block.
> at
> org.apache.hadoop.hdfs.DFSClient$DFSOutputStream.nextBlockOutputStream(DFSClient.java:2814)
> at
> org.apache.hadoop.hdfs.DFSClient$DFSOutputStream.access$2000(DFSClient.java:2078)
> at
> org.apache.hadoop.hdfs.DFSClient$DFSOutputStream$DataStreamer.run(DFSClient.java:2264)
> 2009-09-25 09:26:41,810 WARN org.apache.hadoop.hdfs.DFSClient: Error Recovery
> for block blk_5317304716016587434_176852 bad datanode[2] nodes == null
> 2009-09-25 09:26:41,810 WARN org.apache.hadoop.hdfs.DFSClient: Could not get
> block locations. Source file
> "/hbase/.META./225980069/info/5573114819456511457" - Aborting...
> 2009-09-25 09:26:41,810 FATAL
> org.apache.hadoop.hbase.regionserver.MemStoreFlusher: Replay of hlog
> required. Forcing server shutdown
> org.apache.hadoop.hbase.DroppedSnapshotException: region:
> .META.,demo__assets,asset_283132172,1252898166036,1253265069920
> at
> org.apache.hadoop.hbase.regionserver.HRegion.internalFlushcache(HRegion.java:942)
> at
> org.apache.hadoop.hbase.regionserver.HRegion.flushcache(HRegion.java:835)
> at
> org.apache.hadoop.hbase.regionserver.MemStoreFlusher.flushRegion(MemStoreFlusher.java:241)
> at
> org.apache.hadoop.hbase.regionserver.MemStoreFlusher.run(MemStoreFlusher.java:149)
> Caused by: java.io.IOException: Bad connect ack with firstBadLink
> 10.72.79.108:50010
> at
> org.apache.hadoop.hdfs.DFSClient$DFSOutputStream.createBlockOutputStream(DFSClient.java:2872)
> at
> org.apache.hadoop.hdfs.DFSClient$DFSOutputStream.nextBlockOutputStream(DFSClient.java:2795)
> at
> org.apache.hadoop.hdfs.DFSClient$DFSOutputStream.access$2000(DFSClient.java:2078)
> at
> org.apache.hadoop.hdfs.DFSClient$DFSOutputStream$DataStreamer.run(DFSClient.java:2264)
> After the HRegionServer shuts down itself the regions will be reassigned
> however you might hit this
> 2009-09-26 08:04:23,646 INFO
> org.apache.hadoop.hbase.regionserver.HRegionServer: Worker: MSG_REGION_OPEN:
> .META.,demo__assets,asset_283132172,1252898166036,1253265069920
> 2009-09-26 08:04:23,684 WARN org.apache.hadoop.hbase.regionserver.Store:
> Skipping hdfs://b0:9000/hbase/.META./225980069/historian/1432202951743803786
> because its empty. HBASE-646 DATA LOSS?
> ...
> 2009-09-26 08:04:23,776 INFO org.apache.hadoop.hbase.regionserver.HRegion:
> region
> .META.,demo__assets,asset_283132172,1252898166036,1253265069920/225980069
> available; sequence id is 1331458484
> We ended up with corrupted data in .META. "info:server" after master got
> confirmation that it was updated from the HRegionServer that got
> DroppedSnapshotException
> Since after a cluster restart server:info will be correct, .META. is safer to
> test with. Also to detect data corruption you can just scan .META. get the
> start key for each region and attempt to retrieve it from the corresponding
> table. If .META. is corrupted you get a NotServingRegionException.
> This issue is related to https://issues.apache.org/jira/browse/HDFS-630
> I attached a patch for HDFS-630
> https://issues.apache.org/jira/secure/attachment/12420919/HDFS-630.patch that
> fixes this problem.
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