Hi Stam, I checked the bedpostX results and it didn't have the same number of slices as the input data. It caused problem when I want to to probabilistic tracking. And this missing slices problem happens quite a lot!
Thank you, Su 2013/10/15 Stamatios Sotiropoulos <[email protected]> > Hi > > Is it just the message that worries you? Have you checked whether bedpostx > results have the same number of slices as the input data? Notice that the > diffusion data are transferred to T1 space and lots of inferior/superior > slices may be empty. > > Cheers > Stam > > > On 15 Oct 2013, at 04:47, Huang Su-Chun <[email protected]> wrote: > > Hi dear experts, > > I am running bedpostX on the HCP diffusion data, however, it seems that > sometimes (60% of chance) the bedpostX ended before finishing all the > slices. Take the HCP data for example, it should have 145 slices, but the > betpostX stopped at slice 103 then show a message said "All slice > processed." > > Does anyone know where the problem might be? Thank you! > > Cheers, > > Su > > -- > Su-Chun Huang > Research Scientist > Integrated Brain Imaging Center > Department of Radiology > University of Washington > Seattle, WA 98195 > phone: 206-687-0113 > > _______________________________________________ > HCP-Users mailing list > [email protected] > http://lists.humanconnectome.org/mailman/listinfo/hcp-users > > > -- Su-Chun Huang Research Scientist Integrated Brain Imaging Center Department of Radiology University of Washington Seattle, WA 98195 phone: 206-687-0113 _______________________________________________ HCP-Users mailing list [email protected] http://lists.humanconnectome.org/mailman/listinfo/hcp-users
