Re: [HCP-Users] Projecting diffusion MRI indices to gii surfaces

[Glasser, Matthew]

Yes use the native surface files in ${StudyFolder}/${Subject}/T1w/Native for mapping diffusion data to the surface.  I would use  wb_command -volume-to-surface-mapping.  If you want to map the data to one surface like the midthickness, you can use -cubic.  If you wanted to map it from the whole grey matter ribbon, you can use -ribbon-constrained.  For labels/masks, you would use -enclosing. Peace, Matt. From: Arash Nazeri <arashnaz...@gmail.com> Date: Thursday, October 24, 2013 7:05 PM To: "hcp-users@humanconnectome.org" <hcp-users@humanconnectome.org> Subject: [HCP-Users] Projecting diffusion MRI indices to gii surfaces Dear all, I want to assign values to mid-cortical surface gifti file from the surrounding cortical voxels of a diffusion map (e.g. FA map), to create a .func.gii file.  Could this be carried out using mri_vol2surf with the files provided from HCP?  Should this be carried out using native surface files in the native space? Cheers, Arash _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users   The materials in this message are private and may contain Protected Healthcare Information or other information of a sensitive nature. If you are not the intended recipient, be advised that any unauthorized use, disclosure, copying or the taking of any action in reliance on the contents of this information is strictly prohibited. If you have received this email in error, please immediately notify the sender via telephone or return mail. _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users