Hi Jenn, Thank you for the quick reply. But I don't think those spheres are in fsaverage space, are they? Basically, I have some structural images that I've collected and analyzed with freesurfer. And now I want to resample the native surfaces I've got onto the 164k_fs_LR and 32k_fs_LR meshes so that vertex N is in the same anatomical location in each hemisphere. I was thinking if I could find spheres of these meshes in left and right hemisphere fsaverage space. I could run something like this to get what I need:
wb_command -surface-resample `my subject's left pial` `my subject's left sphere.reg` `left 164k_fs_LR sphere in fsaverage space` BARYCENTRIC L.resampled_pial.164k_fs_LR.surf.gii What do you think, is this the right way to go about it? Thanks, Connor On Mon, Aug 11, 2014 at 9:57 AM, Jennifer Elam <[email protected]> wrote: > Hi Connor, > > > > In the preprocessed data, look in the SubjectID/MNINonLinear directory for > the 164k_fs_LR sphere surfaces and the > SubjectID/MNINonLinear/fsaverage_LR32k directory for the 32k_fs_LR sphere > surfaces. > > > > For future reference, all the files being distributed in all the > downloadable HCP packages/Connectome In a Box are listed in 500 Subjects > Reference Manual Appendix III > <http://humanconnectome.org/documentation/S500/HCP_S500_Release_Appendix_III.pdf> > . > > > > Best, > > Jenn > > > > Jennifer Elam, Ph.D. > Outreach Coordinator, Human Connectome Project > Washington University School of Medicine > Department of Anatomy and Neurobiology, Box 8108 > 660 South Euclid Avenue > St. Louis, MO 63110 > 314-362-9387 > [email protected] > www.humanconnectome.org > > > > *From:* [email protected] [mailto: > [email protected]] *On Behalf Of *Connor Lane > *Sent:* Monday, August 11, 2014 12:50 AM > *To:* [email protected] > *Subject:* [HCP-Users] fs_LR spheres in fsaverage space > > > > Hello HCP users, > > > > Are there 164k and 32k fs_LR sphere files that are in fsaverage lh and rh > spaces somewhere? I'm looking for them so I can resample native surfaces > onto the fs_LR meshes using wb_command -surface-resample. > > > > Thank you in advance, > > Connor > > _______________________________________________ > HCP-Users mailing list > [email protected] > http://lists.humanconnectome.org/mailman/listinfo/hcp-users > _______________________________________________ HCP-Users mailing list [email protected] http://lists.humanconnectome.org/mailman/listinfo/hcp-users
